Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02725 atgcgacgacgggctgccgagtatcggcgcccggctcgacggagattttcatattggatctggcttctcctcgccttctcctctatcctcgctttccttctcttccttctcctccgccaccaagatccgcttccttaccctttacctgagagaaatgctagagttgaacattctgctaagaagagtttgaattttactgaagagattttaagtgtaacatcattctcacggcagttagcagagcaaatgattctggccaaggcttatgtggttattgccaaagaacacaacaatcttcaccttgcttggcaacttagctcaaagatcagaagctgccagcttttgctttcaaaagcttccatgactggtgaacccatcacattggaggaagcagagccaattattaaaagcctttcttttctaatgtttaaggcacaagatatccattatgacattgcaacaacaatagtgactatgaaatcacatattcaagctcttgaagagcgggccaatgctgcaattgttcaaagcactgtgtttggccaaatagcagccgaagcagtacctaagagtcttcattgcctaaatgtgaaactcatgtctgattggctaaggctgccatccctgcaagaactgtcagttgagaggaaaaactctccacggcttgtggacaacaatctatatcatttctgcatattttcagataatgtattggcaacatctgtagctgtaaactcaactgtgtccaatgctgaccatccaaagcaattggtctttcacattgttactaatggagtcaattatggggcaatgcaagcatggtttctaagaaatggctttaaaggagctaccatagaggtacagaacattgaggagtttcattggttgaatgcatcttattctcctcttgtgaagcagctccttaatccagactcacaaaccttctattttggagcatatcaagatttaaatgttgaacctaaaatgcggaatcccaagtatttgtctttattgaatcatcttcggttttacatccctgagatttatccacaacttgagaaggttgtcttcctggatgatgatcttgttgtccagaaggatctgacccctcttttctctctggatttgcatgggaatgtgaatggtgcagttgaaacttgtcttgaagcatttcatcgttactacaagtatctcaacttctcaaactcaattattagctcgaggtttgatccacaggcatgtgcatgggcatttggtatgaacatttttgacttggttgcatggaggaaggcaaatgtgactgcaaggtatcactattggcaagagcaaaatggtgatggtactctatggaagctggggacacttcctcctgctcttctatgtttttatggtttgacagagccacttgacagaagatggcatgttttaggattgggttatgacctaaatattgataaccgcctcattgaaagtgcggcggttattcacttcaatgggaacatgaagccttggttgaagttagctataggcaggtataagccactatgggacaagtacataaatcaaagtcaccctcatcttcaagattgtgtcacaagttga 1602 0.0 MRRRAAEYRRPARRRFSYWIWLLLAFSSILAFLLFLLLRHQDPLPYPLPERNARVEHSAKKSLNFTEEILSVTSFSRQLAEQMILAKAYVVIAKEHNNLHLAWQLSSKIRSCQLLLSKASMTGEPITLEEAEPIIKSLSFLMFKAQDIHYDIATTIVTMKSHIQALEERANAAIVQSTVFGQIAAEAVPKSLHCLNVKLMSDWLRLPSLQELSVERKNSPRLVDNNLYHFCIFSDNVLATSVAVNSTVSNADHPKQLVFHIVTNGVNYGAMQAWFLRNGFKGATIEVQNIEEFHWLNASYSPLVKQLLNPDSQTFYFGAYQDLNVEPKMRNPKYLSLLNHLRFYIPEIYPQLEKVVFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSRFDPQACAWAFGMNIFDLVAWRKANVTARYHYWQEQNGDGTLWKLGTLPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWDKYINQSHPHLQDCVTS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02725 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 530 IPR029044 -
Pste6g02725 533 FunFam Hexosyltransferase 230 526 - -
Pste6g02725 533 CDD GT8_like_1 228 521 - -
Pste6g02725 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 531 IPR029044 -
Pste6g02725 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 60 531 IPR029993 GO:0047262
Pste6g02725 533 Pfam Glycosyl transferase family 8 232 507 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02725 Pste-Chr6 14813784 14827156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02725 1 530 Glycosyltransferase AT2G20810 55.784 0.0 593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02725 6 14813784 14827156 Pste6g02725 6 14813784 14827156 ECH