Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02693 atgaggtgggaaaaggttgaagtaaaggcgataggcacagagggtggaggggcaaatgaggtgtatggcccagggaagaggtggggtcacacctgcaacgccgtcaaaggtggcagacttgtctatgtcttcggtggatacggcaaagataactgtcagaccaaccaagttcatgtcttcgacactgtgaagcagacttggagccaacccgctataaaaggctttccacctactcctagggacagccatacttgcacagcaattggtgataatctgtttgtgtttgggggtacagacgggatgaaccctcttaaggatttgcacatattagatacttctttacatacatgggtttccccaaccataagaggagaagggccaccagcacgtgagggtcatagtgcggcagttgttggcaaacggctattcatctttggtggttgtggaaaatctgcagataataataatgaggtctactacaatgatctttacatattaaatacagagacgtttgtttggaagtgtgctacaacatcaggcactccaccatctcctcgtgatagccacagttgttcatcatggaaaaacaaaattattgtgatagggggcgaagatgggcatgattattatttgtcggatgtccatatccttgatactgatactttaatttggagggagttgagtatatcaggccagttgttgccacctcgcgctggtcattccactgtttcttttggcaagaacttgtttgtttttggtggatttacagatgcccaaaatctctataatgacctttatatgcttgatattgatactggtgtttggacaaatgttacgagtgcaaccaatggtccttctgctagattttctgtggctggtgactgtttagacccttttaagtgcggtgttcttatattcataggtggttgtaataaaagtcttgaggcactggatgatatgtatttcctatatacagggattgctcgagaaggtgaacagaggccagaaaagttatcgttaaggaagcaattgaaactgaaatgccaagaacaaaatctcaatcctagtcaaaatcaagttctagttagatatggagtgggttctgatgtgagcccgatcatgacagtgttaaactatagccagccaagtagactaaatattccagtaaaccaatccttacctcctggaaagaaaatgtttgaagccaaggtcattgaaaacatctcagaaggatatactattgaaactgttattgatggaaagcctcttcgaggaattctgtttttaaacaagccaaactctctgtactcagcagctcatacttccagtaggaaaaggactgttgatgaaattgatagtgttgtctccaatggtatacatcctatcccattaaagactcctaaagtgcccaagctaaatcaaatggaaaaccaagaagcatttcgtggagacagttcagaatctcgtgaacaccgcactgaatctattgctgtgcttatgtcaaatgacccaatgaccgccaatgcttctggtatcctaaaggtgaagttgttttctctaccttctgttggttactggaggatagcctga 1590 0.0 MRWEKVEVKAIGTEGGGANEVYGPGKRWGHTCNAVKGGRLVYVFGGYGKDNCQTNQVHVFDTVKQTWSQPAIKGFPPTPRDSHTCTAIGDNLFVFGGTDGMNPLKDLHILDTSLHTWVSPTIRGEGPPAREGHSAAVVGKRLFIFGGCGKSADNNNEVYYNDLYILNTETFVWKCATTSGTPPSPRDSHSCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLIWRELSISGQLLPPRAGHSTVSFGKNLFVFGGFTDAQNLYNDLYMLDIDTGVWTNVTSATNGPSARFSVAGDCLDPFKCGVLIFIGGCNKSLEALDDMYFLYTGIAREGEQRPEKLSLRKQLKLKCQEQNLNPSQNQVLVRYGVGSDVSPIMTVLNYSQPSRLNIPVNQSLPPGKKMFEAKVIENISEGYTIETVIDGKPLRGILFLNKPNSLYSAAHTSSRKRTVDEIDSVVSNGIHPIPLKTPKVPKLNQMENQEAFRGDSSESREHRTESIAVLMSNDPMTANASGILKVKLFSLPSVGYWRIA 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02693 529 SMART kelc_smart 248 294 IPR006652 GO:0005515
Pste6g02693 529 SMART kelc_smart 91 140 IPR006652 GO:0005515
Pste6g02693 529 SMART kelc_smart 40 90 IPR006652 GO:0005515
Pste6g02693 529 SMART kelc_smart 197 247 IPR006652 GO:0005515
Pste6g02693 529 SUPERFAMILY Galactose oxidase, central domain 209 318 IPR011043 -
Pste6g02693 529 Pfam Galactose oxidase, central domain 39 88 - -
Pste6g02693 529 Pfam Kelch motif 127 171 - -
Pste6g02693 529 SUPERFAMILY Galactose oxidase, central domain 23 245 IPR011043 -
Pste6g02693 529 PANTHER KELCH REPEAT DOMAIN 2 70 - -
Pste6g02693 529 Gene3D - 72 156 IPR015915 GO:0005515
Pste6g02693 529 Gene3D - 157 393 IPR015915 GO:0005515
Pste6g02693 529 Gene3D - 1 71 IPR015915 GO:0005515
Pste6g02693 529 Pfam Galactose oxidase, central domain 236 282 - -
Pste6g02693 529 Pfam Galactose oxidase, central domain 185 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02693 Pste-Chr6 14387013 14392559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02693 54 313 Acyl Lipid Metabolism Gene Families AT3G05420 28.938 1.61e-26 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02693 6 14387013 14392559 Pste6g02693 6 14387013 14392559 ECH