Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02684 atggcaatgtcggaaacaatccctctcactactcccagtgctcaagttgttggcaatgcatttgtggagcaatattatcacattctgcatcaatcccctgaattggtgcacagattttatcaggattcaagtttcttaagcagatcagatagcaatggtgtgatgacaactgtgacaactgtacaagaaatccatgaaaagattacttccctgagttatgaagattatacagcagaaataaaaactgctgatgctcaggagtcacataatggtggtgtcatagttttagtaactggatgcttaactggaaaggataatgtgagaaggaagttctcacagacattcttcctggctccacaagaaaaaggatattatgtcttaaatgacgtatttaggtacattgatgagaatgacacgccaacaccacagttaagttctgcctcggtaaatgttgtcaatgaaaatgctgaggcagtgatcgatccagaatcagaggatgtgcatactcccaaacatgttgtggaagatactgcaactttggcagaaggtgaagaccttaataatggtgctgaagtttatcatcctcaggatgaggaagaaggatcagttattgatgaagaggttgctgaaccccctactgatttaagtcagaatgataatgttatggttcatgattcaacttctgctgtccaggatgatgcaccaaggagatcatatgcatccattgtaatgaaaagtaatgtagcatctggtcatgtctatgttcccagccgagctgcaagagcggcatctgctaaatccagtgaacaatggcctacaactgccaaatcaattcctgggcctgaggcattagctcctactagtgatagtgcacctgggagcagtgatgttcatgaagaagctgaaggccactccatatacatacggaacttgccatttaatgcaacagttgaacaacttgaagaagtctttaagaaatttggtcctattaagcatggtggtatccaagttagaagtagcaagcacggattctgttttggctttgttgaatttgaggaattgagttccatgcacagtgcactagagattagcattagcttgtatgattttgcctgtaattatcaagctctgcttctgattggagcagttgtagggatgaaatgttcaggagttgagtatgttttgcattttttcctcattccacatacttctgaactgaaaggtgatgctgttggatgtttatcgagcatatttgtgttataa 1263 0.0 MAMSETIPLTTPSAQVVGNAFVEQYYHILHQSPELVHRFYQDSSFLSRSDSNGVMTTVTTVQEIHEKITSLSYEDYTAEIKTADAQESHNGGVIVLVTGCLTGKDNVRRKFSQTFFLAPQEKGYYVLNDVFRYIDENDTPTPQLSSASVNVVNENAEAVIDPESEDVHTPKHVVEDTATLAEGEDLNNGAEVYHPQDEEEGSVIDEEVAEPPTDLSQNDNVMVHDSTSAVQDDAPRRSYASIVMKSNVASGHVYVPSRAARAASAKSSEQWPTTAKSIPGPEALAPTSDSAPGSSDVHEEAEGHSIYIRNLPFNATVEQLEEVFKKFGPIKHGGIQVRSSKHGFCFGFVEFEELSSMHSALEISISLYDFACNYQALLLIGAVVGMKCSGVEYVLHFFLIPHTSELKGDAVGCLSSIFVL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02684 420 CDD RRM_SF 306 362 - -
Pste6g02684 420 Gene3D - 250 366 IPR012677 -
Pste6g02684 420 ProSiteProfiles Nuclear transport factor 2 domain profile. 17 133 IPR018222 -
Pste6g02684 420 PANTHER RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN 13 364 IPR039539 -
Pste6g02684 420 SMART rrm1_1 305 375 IPR000504 GO:0003723
Pste6g02684 420 SUPERFAMILY RNA-binding domain, RBD 291 362 IPR035979 GO:0003676
Pste6g02684 420 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 304 366 IPR000504 GO:0003723
Pste6g02684 420 Pfam Nuclear transport factor 2 (NTF2) domain 17 133 IPR002075 -
Pste6g02684 420 SUPERFAMILY NTF2-like 13 134 IPR032710 -
Pste6g02684 420 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 306 362 IPR000504 GO:0003723
Pste6g02684 420 FunFam Nuclear transport factor 2 family protein 8 137 - -
Pste6g02684 420 CDD NTF2 13 135 IPR018222 -
Pste6g02684 420 MobiDBLite consensus disorder prediction 263 299 - -
Pste6g02684 420 Gene3D - 6 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02684 Pste-Chr6 14228522 14234085 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02684 6 14228522 14234085 Pste6g02684 6 14228522 14234085 ECH