Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02661 atggagcgtgagaatgagaagagcagtgtcaacggtcaacgccgcgtgggtttactctacgatgagaggatgtgtaagcaccacacaccagacgaagaggaccatcccgagacccctaatcgcgtcagagccatttggaacaaactccaaagcgctcgcattccccaacgatgcgtgattttggaagccaaagaagccgacgacaaacatctactgtctctacattctgaaaatcatgtaaatcttattaagaatatcagctccaaccaattcaattcgcggaggcataagattgcctcaaaattgaattcgatatattttaatgaaggttcatcagaagctgcttaccttgctgctggttctgctgtagaggttgttaaaagagtggcaagcagggaactggattctgctgttgccattgttaggcctccgggtcatcatgcagaacataatgaagctatgggattttgtctcttcaacaatgtggcagttgctgcaagatatatcttagatgaaagaccagaattaggtgtgaagaaaattctaattgttgattgggatgttcatcatggaaatggtactcaaaaaatgttctggaatgattctcgagttctatttttctctgttcacagacatgagtttgggagtttttatccagccaatgatgatggattttataccatgattggacaaggggaaggtgttggatataacataaatgtcccctgggagaatggaagatgtggtgatgcagattactttgcagtgtgggatcacatcttgcttcctgttgccaaagaatttaaaccagacataattatagtttctgcaggatttgatgcagctgttggtgaccctcttggaggatgtcgtgtcacaccatttggttattctgttatgttgaaaaagttgatgaattttgctgaaggtaggattgtactgattctagaaggaggatataatcttgactccattgcaaaatcaatgcatgcttgtttgcaagttttactagaagataagcctattattggatcatcagaggcctatccttttgagtctacatggcgtgtgattcaagcggttcgccaggagttaagtcccttttggcctacacttgcatgtgaattaccgcaaaagttaatctcacaaattgcaccacctccgcatatttttatctcgagctctgactctgacgctgaggatgataagggtgcaccaagttcagaaaattttggagaacttcttgaagatgtcataaaaccactttctgaactgaaagttgatgccaatgaagatactgatgtttctagtacttggcgatctaaattgtctaatgtttatatatggtatggctcatatggatcaaatatgtggaaagcaagattacattgctatctatcaggtggacaggtggaaggtatgcagaaggactgttctggttcagtgaacagcactctgccaaaagagatcatgtggaagacattcccttgtcatatatttttcggtcgtgattcatcgcattcatggggagtgggaggcgttgcatttcttaatcctgagaaaagctttgagcacaacacctacatgtgcatgtacaaaatatcgctagagcagttcaatgatattttgttccaggaaaatggtttaagccttgatgcaggttctcctttatttgatataactaccctgaattctatctctgataaggagtttgactctctggagattgtcaagggtgcttggtatggtaatgttgtgtacttaggaaaggagcaagatattccagtaattaccatgacatgttcgcttcttgatgttcaacgtttcaaatctgggaagctaccattacgtgcccctaataaagcgtatgccaacaccttaataaaagggttggtagatggagaacaactttcagaggcagaagccatcgcttacatagaaggtgctgctatatcattgtaa 1962 0.0 MERENEKSSVNGQRRVGLLYDERMCKHHTPDEEDHPETPNRVRAIWNKLQSARIPQRCVILEAKEADDKHLLSLHSENHVNLIKNISSNQFNSRRHKIASKLNSIYFNEGSSEAAYLAAGSAVEVVKRVASRELDSAVAIVRPPGHHAEHNEAMGFCLFNNVAVAARYILDERPELGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHEFGSFYPANDDGFYTMIGQGEGVGYNINVPWENGRCGDADYFAVWDHILLPVAKEFKPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVMLKKLMNFAEGRIVLILEGGYNLDSIAKSMHACLQVLLEDKPIIGSSEAYPFESTWRVIQAVRQELSPFWPTLACELPQKLISQIAPPPHIFISSSDSDAEDDKGAPSSENFGELLEDVIKPLSELKVDANEDTDVSSTWRSKLSNVYIWYGSYGSNMWKARLHCYLSGGQVEGMQKDCSGSVNSTLPKEIMWKTFPCHIFFGRDSSHSWGVGGVAFLNPEKSFEHNTYMCMYKISLEQFNDILFQENGLSLDAGSPLFDITTLNSISDKEFDSLEIVKGAWYGNVVYLGKEQDIPVITMTCSLLDVQRFKSGKLPLRAPNKAYANTLIKGLVDGEQLSEAEAIAYIEGAAISL 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02661 653 FunFam Histone deacetylase 15 9 386 - -
Pste6g02661 653 Gene3D Histone deacetylase domain 8 384 IPR037138 -
Pste6g02661 653 Pfam Histone deacetylase domain 35 335 IPR023801 -
Pste6g02661 653 PRINTS Histone deacetylase superfamily signature 270 280 IPR000286 -
Pste6g02661 653 PRINTS Histone deacetylase superfamily signature 143 166 IPR000286 -
Pste6g02661 653 Gene3D - 436 650 - -
Pste6g02661 653 SUPERFAMILY Arginase/deacetylase 14 370 IPR023696 -
Pste6g02661 653 PANTHER HISTONE DEACETYLASE 9-RELATED 15 382 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02661 Pste-Chr6 14053806 14061209 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02661 6 14053806 14061209 Pste6g02661 6 14053806 14061209 ECH
Pste6g02661 6 14053806 14061209 Pste2g00586 2 5594015 5595452 PCT