LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste6g02574	atgaattccatcgccctcaaaaccttcgtggggctccgccagtcctcgccggagggcccgcatttcgccgcccacccgcgccaagccactccccacagcaagttccgggtcgtcgcggggaaattcagccccaagctgcagggccgcaacctccgcgtggcggtggtgggaggcggtccggctggcggagcggcggcggagacactggcgaagggcggcatcgaaacgttcctgatcgagcgtaagctggacaactgcaagccctgcgggggggcgattcccctgtgcatggtgggggagttcgacctgccggtggacatcattgaccggcgcgtgacgaagatgaagatgatatcgccgtcgaacgtggcggtggacatcgggaggacgcttaagccgcacgagtacatcgggatggtaaggcgcgaggtgctggacgcttacctgagggaccgcgctaagcagaacggtgccaacatcatcaatggcttgttcttgaaaatggatatccctaaggataataactccccctatgttctccattactcctgctacgatggcaaaaccggtgcagctggtcagaagtctactttggaagttgatgctgtcattggtgctgatggcgctaattctagagtcgccaagtccattgatgccggtgattatgagtatgccatcgcttttcaggagagggtaaaaattccggatgataagatggtgtattacgaggaccttgcggagatgtacgtgggggatgatgtttctccggatttctacgggtgggtgtttccaaaatgtgaccatgtggctgttggcactggtactgttactcacaagggggacatcaagaagttccagctggcaacaaggaaaagagcagaagacaagatcatgggaggcaagatcatcagagtggaggctcaccctattccggaacatcctcggccccgaaggttgtcgggaagagtggccctggtgggtgatgctgctggttatgtaaccaaatgctctggagaggggatctattttgcagccaagagtgggaggatgtgtgcagagtcaattgttgaaggttctgaaaatgggaaaaggatggtcgaagaaggggacttgaggaagtacttggagaagtgggacaagacttattggcccacttacaaggtcttggatgtgcttcagaaggtgttttataggtccaaccctgccagggaagcgtttgtggagatgtgtgctgatgagtatgtgcagaagatgacctttgatagctatttgtacaagacagtggttcctggcaatccactcgaggatctgaaattggccattaacaccattgggagcttagtgagggccagtgccatcagaagggagatgaacaaacttaatgtatga	1389	0.0	MNSIALKTFVGLRQSSPEGPHFAAHPRQATPHSKFRVVAGKFSPKLQGRNLRVAVVGGGPAGGAAAETLAKGGIETFLIERKLDNCKPCGGAIPLCMVGEFDLPVDIIDRRVTKMKMISPSNVAVDIGRTLKPHEYIGMVRREVLDAYLRDRAKQNGANIINGLFLKMDIPKDNNSPYVLHYSCYDGKTGAAGQKSTLEVDAVIGADGANSRVAKSIDAGDYEYAIAFQERVKIPDDKMVYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAEDKIMGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAESIVEGSENGKRMVEEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGNPLEDLKLAINTIGSLVRASAIRREMNKLNV	462

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste6g02574	462	FunFam	Geranylgeranyl diphosphate reductase	50	457	-	-
	Pste6g02574	462	NCBIfam	geranylgeranyl diphosphate reductase	52	449	IPR010253	GO:0015979\|GO:0015995\|GO:0045550
	Pste6g02574	462	Pfam	Pyridine nucleotide-disulphide oxidoreductase	52	221	IPR023753	GO:0016491
	Pste6g02574	462	NCBIfam	geranylgeranyl reductase family protein	53	355	IPR011777	GO:0016628
	Pste6g02574	462	SUPERFAMILY	FAD/NAD(P)-binding domain	51	433	IPR036188	-
	Pste6g02574	462	PANTHER	GERANYLGERANYL DIPHOSPHATE REDUCTASE	49	455	-	-
	Pste6g02574	462	Gene3D	-	50	461	IPR036188	-
	Pste6g02574	462	NCBIfam	geranylgeranyl reductase	51	449	IPR011774	GO:0045550
	Pste6g02574	462	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	52	74	-	-
	Pste6g02574	462	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	320	335	-	-
	Pste6g02574	462	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	199	214	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste6g02574	Pste-Chr6	13152674	13154942	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste6g02574	6	13152674	13154942	Pste6g02574	6	13152674	13154942	ECH