Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02573 atggcaacggcaccggcaactaccttcactattggaaccaccggttccctcggccgacgaggaagctcacttcctcaatcaaaacctttcgggttgaaattcaactcccagaatcatttgaagagtttctgtggcctcaaggccatgtcatctgtgagatgtgattccgaatcatccttctttggtaacaaaactggtgctgctctgcgggcatcttttgcatccaaagctcaacaggacaacaaaaacctcagctacaacttgcagcctcaggcttcgtacaaagttgcagttcttggtgctgctggagggataggtcagcccctggcccttctcatcaagatgtcgcctttaatttccgagctcaatctctatgatatcgccaatgtcaagggagttgctgctgatctcagtcactgcaacacaccctcacaagtcagggatttcactggacctgctgagttggcaaattgtttgaagggtatgaatgttgttgtcatacctgctggtgttcctaggaagcccggcatgactcgtgatgaccttttcaacatcaatgctggcatagtcagggacttggtttcggctgttgccgataattgccctggtgcttttattctaattatcagtaaccctgtgaactctaccgtgcctattgccgccgaagttttgaaacaaaagggtgtgtatgatcataagaagctcttcggtattactacactggatgttgtgagggcaaacacgtttgttgctcagaggaagaacctgaagctgatcgatgttgatgtcccagttgttggtggccatgctgggattaccattcttcctctgttgtcaaagacaagaccctctgtgagtttcactgatgacgaaattgatgagctaactgtgaggattcaaaacgctggaactgaagttgtagaagcaaaggcaggtgcgggttccgcaaccttgtcaatggcatatgcagcagctaggtttgttgaatcgtctctccgcgcacttgatggagatggggatgtctatgagtgctcgtttgtgcaatcagatttgactgaccttccattttttgcttcgagggtgaagcttggtaggaaaggaatcgaggctttaattccatctgacctccaagggttgagcgactatgagcagaaggctttggaagcacttaagccagaactcaaggccagcatagagaaggggattgcttttgctcagaagcaagctgttacggcttaa 1239 0.0 MATAPATTFTIGTTGSLGRRGSSLPQSKPFGLKFNSQNHLKSFCGLKAMSSVRCDSESSFFGNKTGAALRASFASKAQQDNKNLSYNLQPQASYKVAVLGAAGGIGQPLALLIKMSPLISELNLYDIANVKGVAADLSHCNTPSQVRDFTGPAELANCLKGMNVVVIPAGVPRKPGMTRDDLFNINAGIVRDLVSAVADNCPGAFILIISNPVNSTVPIAAEVLKQKGVYDHKKLFGITTLDVVRANTFVAQRKNLKLIDVDVPVVGGHAGITILPLLSKTRPSVSFTDDEIDELTVRIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALDGDGDVYECSFVQSDLTDLPFFASRVKLGRKGIEALIPSDLQGLSDYEQKALEALKPELKASIEKGIAFAQKQAVTA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02573 412 Pfam lactate/malate dehydrogenase, NAD binding domain 95 237 IPR001236 GO:0016491
Pste6g02573 412 CDD MDH_glyoxysomal_mitochondrial 94 405 IPR010097 GO:0006099|GO:0030060
Pste6g02573 412 PANTHER MALATE AND LACTATE DEHYDROGENASE 77 408 - -
Pste6g02573 412 ProSitePatterns Malate dehydrogenase active site signature. 238 250 IPR001252 GO:0006108|GO:0016615
Pste6g02573 412 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 239 404 IPR022383 GO:0016616
Pste6g02573 412 FunFam Malate dehydrogenase 92 238 - -
Pste6g02573 412 Gene3D - 92 238 - -
Pste6g02573 412 FunFam Malate dehydrogenase 239 407 - -
Pste6g02573 412 Gene3D - 239 410 IPR015955 GO:0003824|GO:0016616
Pste6g02573 412 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 95 237 IPR036291 -
Pste6g02573 412 MobiDBLite consensus disorder prediction 1 23 - -
Pste6g02573 412 SUPERFAMILY LDH C-terminal domain-like 238 405 IPR015955 GO:0003824|GO:0016616
Pste6g02573 412 NCBIfam malate dehydrogenase 95 406 IPR010097 GO:0006099|GO:0030060
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02573 Pste-Chr6 13146997 13150022 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02573 6 13146997 13150022 Pste6g02573 6 13146997 13150022 ECH