Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02536 atgtctaagatattcttgttatgttttctcgcggggcttctgcttcttgttcaggcacatgaacatgataagaaaattcgattttatgaactgaagagaggagatttcagattgaatttgacaaattatggtgctacaattatctctgtcataacccctgataaacacggaaaactagctgatattgttcttggctacgattcaattgattcttacaagaatgatgcagtatacttcggtgcgcttattggacgtgtagcaaatagaattggaggagctaaattcactttggatggcaaaacctacaaattgcccgccaatgatcacgggaatacacttcatggtggcgctagaggcttcagtgatgttgtatggtcagtgaaatcccacaagaaacgcagtcatgtaacatttacctacgtcagttttgaaaatgaacaaggctttcctggaaaacttaaggtctctgtgacatacatgctcattggaacacgcgaattgggtgtgagaatgatagccaagccagtggacaaagccacaccagtgaatctagcgcagcatacttactggaaccttgggggccacaacagtggtgacattctttctcacattgttcagatctttggttcgtacatcacaccagtggacaagcttctcatccccacaggcgaaatcatatctgttaagggcaccccatatgatttccttgagccaaaaaaggttagaagccagattcaggaaggtctatatgatatgaactacgtgctagacaaaagtttccaaaagcacttaagtaaggctgctgtggtgagagaccctgtctctgggaggaaaatggagctgtggtcaaaccaacttggtctgcagttctatactagtggacaattgaatgctaccaaaggcaaggatggggccatatataacaagcattctggcattgccttagaaacacagggtttcccagattccgtgaattatccttacttcccatcacagattgtgaagcctggggaaatttacaagcacaacatgctttacaaattcacagctagataa 1056 0.0 MSKIFLLCFLAGLLLLVQAHEHDKKIRFYELKRGDFRLNLTNYGATIISVITPDKHGKLADIVLGYDSIDSYKNDAVYFGALIGRVANRIGGAKFTLDGKTYKLPANDHGNTLHGGARGFSDVVWSVKSHKKRSHVTFTYVSFENEQGFPGKLKVSVTYMLIGTRELGVRMIAKPVDKATPVNLAQHTYWNLGGHNSGDILSHIVQIFGSYITPVDKLLIPTGEIISVKGTPYDFLEPKKVRSQIQEGLYDMNYVLDKSFQKHLSKAAVVRDPVSGRKMELWSNQLGLQFYTSGQLNATKGKDGAIYNKHSGIALETQGFPDSVNYPYFPSQIVKPGEIYKHNMLYKFTAR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02536 351 CDD galactose_mutarotase_like 29 348 IPR047215 GO:0016853
Pste6g02536 351 Pfam Aldose 1-epimerase 29 347 IPR008183 GO:0005975|GO:0016853
Pste6g02536 351 SUPERFAMILY Galactose mutarotase-like 20 348 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pste6g02536 351 PIRSF GALM 16 351 IPR015443 GO:0016853|GO:0019318
Pste6g02536 351 Gene3D - 16 350 IPR014718 GO:0030246
Pste6g02536 351 PANTHER ALDOSE-1-EPIMERASE 25 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02536 Pste-Chr6 12612461 12615632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02536 13 350 Miscellaneous Gene Families AT3G47800 59.118 4.58e-149 422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02536 6 12612461 12615632 Pste6g02536 6 12612461 12615632 ECH