Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02500 AGTGAACAAGGAAAGAAAATGTTCATATCCCTTCATAGAATCATTTTGGCTTTGAAACTATCATATCTGCTATTTCTCTTTTCTTCAATTCCTAATGTGGAAGCCTACACGGCTAGAGCTCATATATTCATTTATGCTGGCTGTTCTCAAGAAAAATACCAACCAAGCACACCCTTTGAAGCCAACCTTAATTCCTTTCTGTCTTCAGTTGCTGGCTCATCTGCTGACACATCTTACAATAGCTTTGCCATTGGAAATGGAAGCTCATCACCACCACAGGGGTCCATATATGGCTTATACCAGTGCAGGAGTGATTTGAGGCCAAATGATTGCTCAAAATGTGTCAAAAGTTGTGTTGACCAAATAGGCTTGATTTGTCCCTTTGCACTTGGGGCATCTTTGCAACTTGAAGGCTGTTATCTAAGATATGAGAATGTTGATTTCCTTGGCAAACCTGACACAAGCCTTTGGTACAAGAAGTGCAGTAGGACAGTGGCAAATGATGCAGAGTTTTTAAGGCGTAGAGATGATGTTCTTGCGGATTTGCAAGCAGCTAATGGATTTGGAGTCAGTACTTCTGGTTTTGTTGAAGGGTTTGCACTGTGTTTGGGGGATTTGACTGTGGCTGATTGCTCTTCTTGCCTTCAAGAAGCAGTGGGAAAGCTTAGAAGTATATGTGGATCAGCAGCATCAGCTGATGTGTTCTTGGCACAATGTTATGCTCGGTACTGGGAAGCTGGATACTATGATGAAGCAGAATCTTCTAAGGACGATGACCAAGTGGGGAAATCAGTTGCCATTATTGTGGGAGTAATAGCAGGTCTAGCCATTTTAGTGGTCCTTCTCTCAATCTGCAGAAGAGCAATGGGTTAAAAAATGTGGAGGGGTTACACACAGAGGCAGTAAGGGGAGGAGGGTAATCATTTCAAAAAGTCAGAAAATTGTTTGTTTAAATTTTGCATGAAAGTGCTGCTTCCACTTTTTTTGTCCTATAATTAATACATTATGTATTTCAGAAGGTGGGTG 1026 0.4133 SEQGKKMFISLHRIILALKLSYLLFLFSSIPNVEAYTARAHIFIYAGCSQEKYQPSTPFEANLNSFLSSVAGSSADTSYNSFAIGNGSSSPPQGSIYGLYQCRSDLRPNDCSKCVKSCVDQIGLICPFALGASLQLEGCYLRYENVDFLGKPDTSLWYKKCSRTVANDAEFLRRRDDVLADLQAANGFGVSTSGFVEGFALCLGDLTVADCSSCLQEAVGKLRSICGSAASADVFLAQCYARYWEAGYYDEAESSKDDDQVGKSVAIIVGVIAGLAILVVLLSICRRAMG 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02500 290 Gene3D - 40 148 IPR038408 -
Pste6g02500 290 Gene3D - 154 246 IPR038408 -
Pste6g02500 290 ProSiteProfiles Gnk2-homologous domain profile. 150 248 IPR002902 -
Pste6g02500 290 FunFam cysteine-rich repeat secretory protein 3 40 148 - -
Pste6g02500 290 FunFam Cysteine-rich repeat secretory protein 15 153 246 - -
Pste6g02500 290 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 16 288 - -
Pste6g02500 290 ProSiteProfiles Gnk2-homologous domain profile. 41 148 IPR002902 -
Pste6g02500 290 Pfam Salt stress response/antifungal 164 243 IPR002902 -
Pste6g02500 290 Pfam Salt stress response/antifungal 48 145 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02500 Pste-Chr6 12347204 12350254 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02500 10 283 Receptor kinase-like Gene Family AT5G40380 26.715 6.15e-16 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02500 6 12347204 12350254 Pste6g02500 6 12347204 12350254 ECH