Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02389 atgaagatgagtgagatgtggacaacaatgggatcaaccttagctagcttcatgttcttgtggacgatcatgaggcagtactgtccctacggggttcaacgtttcttcgagaagtacacacatagaatcacgagttacttctatccttatgttcgaatctccttccatgagtacatgggagacagattgaagcgtagtgaggcctatgctgctgtggaggcatacctcagtgccaacacatcaaagagtgctaaaaggctgaaagctgaaatgggtaaggacagcagcaacttggtgctgactatggatgagtatgaaagagtaaccgatgattatgaaggtataaaagtttggtgggtatctagcaaagttatgtctgcaacaaggtccccaatgtcttactatccagaacaggagaaaaggttctacaagctcacttttcacaacaagtatagggacatgataactgagtcatatttggagcatgtgatgagggaggggaaggagattcgtttgaggaacagacagaggaagttgtacactaatagccctggctataagtggccgagttacaagcaaacgatgtggagccacattgtgtttgaacatcctgcaacgtttgacacaatggccatggagcctgagaagaagagagagataattgaggatttggtcactttcagcaagagcaaggatttctatgccaggattgggaaggcatggaagagggggtaccttctttatggccctccagggactggcaagtccaccatgattgcagcaatggccaatttgttggcctacgatgtctatgacttggagctaactgcagtgaaggacaacaccgagctgaggaagcttctgattgagacaacaagtaagtctataattgttattgaggacattgattgctctcttgatcttacagggcagaggaagaagaagggagataagttgtcagatgatgagaatgaaaaggatgttgttggaaggaaagaggtgaaagaggaaggagggagtggaagcaaagtcacactctcagggcttttgaatttcattgatgggatttggtctgcttgtggaggggagaggttgatagtgtttacaaccaattatgtggagaagcttgatcctgctctcattagaagggggagaatggacaagcatattcagctctcctattgcacttttgatggcttcaaagtgcttgccaataattacttgaagcttgaaactcatccattgtttgatactattaagaggctcgtaggggaggtcaagatcaccccagctgatgttgctgaaaacctcatgcctaagtccccattggacgatcctcacaagtgtctctcaaacttgattgaagcacttgaggaggcttcaaaaactcaggagctgaggcagagtagtcccatcaaggaggaacatgaggaaattcttcaacaaaatggaaccattaaggaaaacggtgaccttccaggtgacaaacccattcatcaatgccagcgatggctcgttaatgatacataa 1530 0.0 MKMSEMWTTMGSTLASFMFLWTIMRQYCPYGVQRFFEKYTHRITSYFYPYVRISFHEYMGDRLKRSEAYAAVEAYLSANTSKSAKRLKAEMGKDSSNLVLTMDEYERVTDDYEGIKVWWVSSKVMSATRSPMSYYPEQEKRFYKLTFHNKYRDMITESYLEHVMREGKEIRLRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFDTMAMEPEKKREIIEDLVTFSKSKDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLAYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGDKLSDDENEKDVVGRKEVKEEGGSGSKVTLSGLLNFIDGIWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIQLSYCTFDGFKVLANNYLKLETHPLFDTIKRLVGEVKITPADVAENLMPKSPLDDPHKCLSNLIEALEEASKTQELRQSSPIKEEHEEILQQNGTIKENGDLPGDKPIHQCQRWLVNDT 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02389 509 MobiDBLite consensus disorder prediction 312 339 - -
Pste6g02389 509 ProSitePatterns AAA-protein family signature. 364 383 IPR003960 GO:0005524|GO:0016887
Pste6g02389 509 SMART AAA_5 241 396 IPR003593 GO:0016887
Pste6g02389 509 MobiDBLite consensus disorder prediction 312 341 - -
Pste6g02389 509 Pfam ATPase family associated with various cellular activities (AAA) 246 393 IPR003959 GO:0005524|GO:0016887
Pste6g02389 509 Gene3D - 390 463 - -
Pste6g02389 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 455 IPR027417 -
Pste6g02389 509 PANTHER BCS1 AAA-TYPE ATPASE 9 464 - -
Pste6g02389 509 CDD RecA-like_BCS1 220 390 - -
Pste6g02389 509 FunFam AAA-ATPase ASD, mitochondrial 197 390 - -
Pste6g02389 509 Pfam Domain associated at C-terminal with AAA 29 121 IPR025753 -
Pste6g02389 509 Gene3D - 201 389 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02389 Pste-Chr6 11675264 11677111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02389 206 419 Miscellaneous Gene Families AT5G58870 28.829 7.36e-12 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02389 6 11675264 11677111 Pste6g02389 6 11675264 11677111 ECH