Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02386 atgaaaagagggagagcaggcaagttcgacagtgtcgtcgcattgttcagacaacgatccattcagattctcatcgccgtttcgctcttgtaccttctcttcttcacccccttcctcttcagtatcgcccaagaaaaacacttccccacccaccaattacttcgccgcccaaacgacgtcgtctccggtttgatcttaaacgacaccgcattcgattccaacttgtataaatccgcctgccgcgtggggaaggccatttgggcggaactaaaatctggcaaactgcggggcctctttcccaagcccgataaccgatccgggctatgcccgcgatccgtctcgctttccgggcccgagtttttgggccgcgggagtgtgatgtttattccctgtggcctcacgttggggtcccacgtaacggtggttgcgaagccgttaaggacgcaacggaagacgtgtcagttcgtgttggagttgcaggggttgaagacggtggaaggtgaagaaccacctagggtgttgcatttcaatcctaggttgcaaggggattggagtgggaagcctgttattgaactcaacacctgttaccgcatgcattggggtactgcattacgctgtgatggttggaaatccagagctggtgaagatactgttgatgggctggtgaaatgtgagaagtggattgggggtcatgatgatgataggaaggcagtggagaccaaggcacaatggtggttgaagagattgataggtcggacaaaaagagtcacagttgattggccatttccattttctcagaacaagctttttgttcttactcttagtgctggattggagggttaccatattaatgttgatgggaggcatgtcacctcttttccttatcgcacttttactcttgaggatgctactggtcttagtttgagtggagatattgatgtctattctgtgcttgccggctctctgccttcagtgcatcctaacatttccccagagcagcatcttgaattttcaaccagatggtgtgccccgaatcttcctctctctggtgtggaattgttcgtaggaatcctttcagctggaaaccattttgctgagcggatggctgtgaggaagtcatggatgcagcatagctttatcaaatcttcaaatgtggtggctcgtttctttgtagcactgcacccgaggatagaagttaatgtggagttgaagaaggaagcagagtattttggtgatattgttatagttccttacatggataactatgaccttgttgtgttgaaaacagtggccatatgtgaatatggggttcgcactgtttctgcacagtatatcatgaagggtgatgatgacacttttgtaaaagttgatgctattattaatcgagctaggcatgttccacattctacgagcttttatattggaaacattaattaccgccacaaacccttgcgccgtggtaaatgggctgtgacatatgaggtgaaagggaagagcctaccgttgtgggaaccggaccaaggaaaaaaggagaaggaatcgtcgttggagaggttaccggagcggattgctttcggaacgaaatggagaagacgagggtga 1602 0.0 MKRGRAGKFDSVVALFRQRSIQILIAVSLLYLLFFTPFLFSIAQEKHFPTHQLLRRPNDVVSGLILNDTAFDSNLYKSACRVGKAIWAELKSGKLRGLFPKPDNRSGLCPRSVSLSGPEFLGRGSVMFIPCGLTLGSHVTVVAKPLRTQRKTCQFVLELQGLKTVEGEEPPRVLHFNPRLQGDWSGKPVIELNTCYRMHWGTALRCDGWKSRAGEDTVDGLVKCEKWIGGHDDDRKAVETKAQWWLKRLIGRTKRVTVDWPFPFSQNKLFVLTLSAGLEGYHINVDGRHVTSFPYRTFTLEDATGLSLSGDIDVYSVLAGSLPSVHPNISPEQHLEFSTRWCAPNLPLSGVELFVGILSAGNHFAERMAVRKSWMQHSFIKSSNVVARFFVALHPRIEVNVELKKEAEYFGDIVIVPYMDNYDLVVLKTVAICEYGVRTVSAQYIMKGDDDTFVKVDAIINRARHVPHSTSFYIGNINYRHKPLRRGKWAVTYEVKGKSLPLWEPDQGKKEKESSLERLPERIAFGTKWRRRG 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02386 533 Pfam Galactoside-binding lectin 127 318 IPR001079 GO:0030246
Pste6g02386 533 SUPERFAMILY Concanavalin A-like lectins/glucanases 127 319 IPR013320 -
Pste6g02386 533 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 125 320 IPR001079 GO:0030246
Pste6g02386 533 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 287 495 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pste6g02386 533 Gene3D - 125 218 - -
Pste6g02386 533 FunFam Hydroxyproline O-galactosyltransferase GALT6 125 218 - -
Pste6g02386 533 Gene3D - 243 318 - -
Pste6g02386 533 Pfam Galactosyltransferase 366 485 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pste6g02386 533 SMART Gal_bind_lectin_2 129 319 IPR001079 GO:0030246
Pste6g02386 533 CDD GLECT 128 317 IPR001079 GO:0030246
Pste6g02386 533 Gene3D - 345 500 - -
Pste6g02386 533 FunFam Hydroxyproline O-galactosyltransferase GALT2 235 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02386 Pste-Chr6 11650494 11658545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02386 2 494 Glycosyltransferase AT1G74800 55.615 0.0 598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02386 6 11650494 11658545 Pste6g02386 6 11650494 11658545 ECH