Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02347 atggtttccgattcaattgccgctatgccgattccatctgccgcaaacactaagaacccgggaaagaagaagaggaccaacaggtccgcgaaattgaaacagtgcaaaattgatgcgcgcagagaacaatggttatcccaaagtgcggtgaagaataaggggtgcaaggatggagtggatgatgacagtcacgccccgccatctcccgcagttaaacatacgaaccgccctttggagccgttgaacacaggcggaagagctgaagaggacgatggattgatccatcacgacagtgattcagaatctccgaccaactgtcctgctggtgtgttatgtgggaccgattctggaacgaatttcacaggcagcagcagtagcggcggaagcagtagcagtagcaccagttctagcagcggcggatgctgttccgggaacatcaccgaggaggaagacgaaggtgatgatgatggatgcttggatgattgggaggctatggcagatgctttagccgctgatgacaagcgtgaaaacccttgtcctgattcacctcctgtgattttgccttgcgagggatcgaatgtagggtctccaaattcaaaatcagagggtgttagatttgttccttggggctctggcaatagccgggcgtggagggcggatgatgcctttcgccctcagagtttgcccaatttgtctaaacagctcagtatgcccaaccctgatcgtcgttgcgtaggaggcggcccttggggtcgtgcctccatgccatcctcgtgtccaatttgctgtgaagatcttgatttgacggacacgagcttcttgccttgtctctgtggatttcggctttgcctcttctgccacaagaggattctggaggaggatgggcgttgtcctgggtgtaggaagccttatgagtgtgagcctgttgagacagaggctagtgtgcttggaggcagcctcactcttcggttggcacgttcttgcagcatgatcgagaggtcttga 1005 0.0 MVSDSIAAMPIPSAANTKNPGKKKRTNRSAKLKQCKIDARREQWLSQSAVKNKGCKDGVDDDSHAPPSPAVKHTNRPLEPLNTGGRAEEDDGLIHHDSDSESPTNCPAGVLCGTDSGTNFTGSSSSGGSSSSSTSSSSGGCCSGNITEEEDEGDDDGCLDDWEAMADALAADDKRENPCPDSPPVILPCEGSNVGSPNSKSEGVRFVPWGSGNSRAWRADDAFRPQSLPNLSKQLSMPNPDRRCVGGGPWGRASMPSSCPICCEDLDLTDTSFLPCLCGFRLCLFCHKRILEEDGRCPGCRKPYECEPVETEASVLGGSLTLRLARSCSMIERS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02347 334 CDD mRING-HC-C4C4_CNOT4 258 302 IPR039515 -
Pste6g02347 334 ProSiteProfiles Zinc finger RING-type profile. 259 301 IPR001841 -
Pste6g02347 334 MobiDBLite consensus disorder prediction 83 98 - -
Pste6g02347 334 MobiDBLite consensus disorder prediction 1 159 - -
Pste6g02347 334 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 252 315 IPR013083 -
Pste6g02347 334 Pfam RING/Ubox like zinc-binding domain 259 305 - -
Pste6g02347 334 SUPERFAMILY RING/U-box 257 309 - -
Pste6g02347 334 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 256 331 IPR039780 GO:0004842|GO:0030014
Pste6g02347 334 MobiDBLite consensus disorder prediction 99 144 - -
Pste6g02347 334 FunFam RING/U-box superfamily protein 252 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02347 Pste-Chr6 11413438 11416356 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02347 6 11413438 11416356 Pste6g02347 6 11413438 11416356 ECH