Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02316 atgtccgaatcacaatccccttgggctgccaagaaaaaacgcatgagagagaaagttcgcaatataatacgtaatgaagctggtaagaattgccataagttttaccatgcatatgacaactatatgacttatgcatttccgcatgatgagcttaaacctctcactaaaactttcaccaactccctaagtgagctgggaaatttgaagcttgaacacttgcctcaagactacaatggcactgcccttacgcttattgaatcactgtctagccttgttattatgggaaataatactgaatttgagagggcagtgctctggctttctgaaaatctaacatttgatgttgatgcacgtataaatctttttgagtgcaacataagagttcttggaggacttgtctctgctcatttacttgcgtctgattcttcaaagaagttgtttcaaggagcttacaataatcagttgctacctctggctgaagatttagggaaacgctttctaccagcattcaatacacctactgggttgccatatgcatggattaacttaaagatcatcttgtcttctgtactctggtctaccacagcccactctggtgtgccagttccaccactccatgtggctgtttga 630 0.0 MSESQSPWAAKKKRMREKVRNIIRNEAGKNCHKFYHAYDNYMTYAFPHDELKPLTKTFTNSLSELGNLKLEHLPQDYNGTALTLIESLSSLVIMGNNTEFERAVLWLSENLTFDVDARINLFECNIRVLGGLVSAHLLASDSSKKLFQGAYNNQLLPLAEDLGKRFLPAFNTPTGLPYAWINLKIILSSVLWSTTAHSGVPVPPLHVAV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02316 209 PRINTS Glycosyl hydrolase family 47 signature 33 53 IPR001382 GO:0004571|GO:0005509|GO:0016020
Pste6g02316 209 PRINTS Glycosyl hydrolase family 47 signature 118 136 IPR001382 GO:0004571|GO:0005509|GO:0016020
Pste6g02316 209 PRINTS Glycosyl hydrolase family 47 signature 168 187 IPR001382 GO:0004571|GO:0005509|GO:0016020
Pste6g02316 209 SUPERFAMILY Seven-hairpin glycosidases 33 190 IPR036026 GO:0004571|GO:0005509|GO:0016020
Pste6g02316 209 Gene3D - 11 200 IPR012341 GO:0005975
Pste6g02316 209 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 9 186 IPR044674 GO:0004571|GO:1904380|GO:1904382
Pste6g02316 209 Pfam Glycosyl hydrolase family 47 34 184 IPR001382 GO:0004571|GO:0005509|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02316 Pste-Chr6 11203996 11206784 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02316 10 184 Glycoside Hydrolase AT1G27520 78.286 3.74e-95 286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02316 6 11203996 11206784 Pste6g02316 6 11203996 11206784 ECH