Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02313 CTGAAGCTGAAATACCTTGAATGGCAGAGAAGAAGCAAACCCTACCGAGGGTGCTGGTTGTGGGGCCCCCAACCTGCTTTGCAACTCTCCAACCTCTCTACTCTCACAAGTAAGCGAATTGGGATTATTGGACTGGGAAGCGTTGGAATGGAAGTGGCCAAGAGGCTCGGGTCCTTTGGATGCATTATCTTATACAACTCCAAGCATAAAAAAGCTACAGTTTCATATCCTTTCTATTCTAGTGTTGTTGAGCTTGCAACTAATTGTGATGCTCTTGTGGTATGTTGTGCACTTAATGAGCAAACAAAGCACATAATTAACAGGGAAGTCATTTTGGCACTAGGAAAAGGACGGTTCATTGTCAATGTTGGAAGAGGCGGTCTTATTGATGAAAAACAATTGGTGAAGTGTTTGAGAGAAGGTGAAATTGGAGGTGCTGCTTTGGATGTGTTTGAGAACGAGCCTTATGTTCCTGAAGAGCTCCGTGCAATGAATAATGTGGTTTTGTCTCCACATTGTGCTGCTTTTACTGCGGAATCTTTGATGAATTTGTGTGAACTTGTGGCAGGGAATTTAGAAGCCTTCTTCTTAAATAAACCCCTAATTACTCCACTGAATCACCAAATTAAGGCAATGGAAGAGAAGCACAACCACAATGATAATAAGGAGCTTCAACCACTGCTTGTGCTTGGTCCTCCATTTATGTTCCCAGTTTTTGAAGCTCAAAACCTTCACAACTACCGTTTCCTAAATGCATTCTCCTCACAGCTCCCTCTCCACCAATTCCTCACTGAGCAAAATATTGAGCCTTCATCTATTCAAGCCATTCTCTGCAGCCCTCGCCAGAAGGTCTCTGCTGATGTCATCCGGCTCCTCCCTTCACTCAGCCTCATTATGACCACTAGTAATGGAACTAGTCACATAGATTTGGCTGAGTGCAGCCACCGTGGTATTCAGGTTGCTCCTATTCCAGGAGACCAATTAGCTGTGGATATTGCTGACATGGTTGTGGGGTTGTTAATTGATGTCATGTGGAAAATTTCTGCCTCTGATCGTCATATTAGGAAGTGGGGTTCTTCTAAACCCTGCAATCTTTCTTCTGGTTCCAAGCTAGAAGGCAAGCGAGTAGGAATTATTGGATTGGGAAGAATTGGCAGAGAAGTTGCTAAAAGGCTTGAGGCCTTTGGTTGCAAAGTCATGTACAATGGAAGGAACGAGAAGCCATTTGTGACATACCCTTTTTATTCTAATGTTGTAGAGCTTGCCAGTAATAGTGACATCCTTGTGCTTTCTTGTTCATTAAATGAGCAAACAAGGCACATAGTGAACAGGGAAGTGATGTTGGCATTGGGGAAAGAAGGAATAATTGTGAATATTGGACGTGGAGCTTTAATTGATGAAAAGGAATTGGTGAGGTGTTTGATGGAAGGGGAGATAAGGGGTGCTGGCTTGGATGTGTTTGAGAATGAGCCTAATGTTCCCAAAGAGCTCTTTCCATTGGATAATGTTGTCCTCTCCCCACATGCTGCTTCATTGACTTCACATCGTATATATGATGATAAAACAGGTCCAACAGCTAAAAAGAAAATAGATCGGTCTACAAACTCCAAATCCACTGAAAAAAAGAAAATTACTTTTAAGGAAAACCCTCATGGATTGTGGATGAGTGCTACGGGTATTAAACAGTGTGCTGAAGTTGCAAACCAGAAAATCATAAATAGTACCACTTTGCTGGAGCTCAATCACCAGGCAATGACGGATAAGCACAAACACAATGATGATAAGAAGCTTCAGCCAATCCTTGTATTTGGTCCTCCTTTAGTTTTCCCAACCTTTGAAGCTCAAAACCTTCAAAACTACCATTTCCTCAAAGCTTACTCCTCACAACTTCCTCTTCACCAATTCCTCGCCAAGCAAAATGTTGACCCTTCGTCCATTCAAGTCATACTCTGCAACCCTCACCAGAAGCTCTCTGTTGATGTCATCCCGCTCCTCCCATCACTCAGCCTCATTGTGACCACCAGTGCTGGAACCGACCATATAGACTTGGCTGAGTGCAGCCACAGAAATATTCAGGTTGTCTCTATTGCAGGAGAGCATGCTGAGGATATAGCTGACATGACTGTGGGGTTGTTGATTGATGTTATCTGGAAAATTTCTGCCACTAATCGTCATGTTAGGAAATGGGGTCCTTCTATCCCCTTGAATTTTTCTTTTGGTTGCAAGCTAGAAGGCAAGCCAGTAGGGATTGTTGGATTGGGAAAAATTGGCGTAGAAGTTGGTAAAAGACTTGAGGCCTTTGGTTGCAAAATCATGTACAATGGAAGGAGCCAGAAGCCATTGGTGACATACCCTTTCTATTCTAATGTTTTAGAGCTTGCTAGTAATAGCGACATCCTTGTGATTTCTTGTTCATTAAATGAGCAAACAAGGCACATGGTGAACAGGGAAGTGATGTTGGCATTGGGGAAAGAAGGAATTATTGTGAATGTTGGACGTGGAGCTCTAATTGATGAAAAGGAATTAGTCAGGTGTTTGATGGAAGGGAAGATAGGGGGTGCTGGCTTGGATGTGTATGAGAACGAGCCTAACATTCCCAAGGAGCTCATTCAGTTGGATAATGTTGTCCTCTCCCCACATGCTGCTTCATTGACTTCAAATCGTTTAAATTCTGTATGTGAACGTGTAACAGAGCGTCTGGAAGCATTCTTTTCAAGTAAACTGCCGAATATCCTGCACTTTAGTGGAGCTCAAACACCAATTGCAATGGTGGATAAGCTTCAACCACTCCTTGTGCTTGGTCCTCCATTAATTCTCCCAATCCTTGAAGCTCAATACTTTCACAAATACAGTTTCCTCAAAGCTTTCTCCTCTGAACTCCCTCTCCATCAATTCCTCTCCAAGCAAAATGTTGACCCTTCATCCATTCAAGCCATACTTTGCAACCCTCTCCAGCAGGTCTCTGCAGATGTCCTCCGCCTCCTCCCTTCTGTCAGCATCATTGTCACCACCAGTGCTGGAACCGACCACATTGACTTGGCCCAGTGCAGCTGCCTCGGCATTCAGGTTGTCTGTGTTCCAGGAGATCAAGCTGATGATGTTGCTGACATGGCCATCGGCTTGTTGATTGATGTCATGATGAAAATTTCTGCTGCTTATCGACATTTTAGCAAATGGGGTCCTTCCAGGCCTTCAAATCTTTATTTTGGTTCCAAGCTAAAAGGCAGGCGAGTAGGAATTGTTGGATTGGGGAAAATTGGTAAAAAAGTTGCTAAAAGGCTTGAGGCTTTTGATTGCAGAATAATGTACCATTCAAGAAACGAGAAGCCATTTATCACGTATCCATTTTATTCCAATGTTGTTGATCTTGCTCGTAACAGTGATGTCCTTGTGCTGTGTTGTCCATTAAATGAGCAAACAAGGCGCATAGTGAACAGGGAAGTGATGTTGACTTTGGGGAAAGATGGAGTTATAGTGAATGTTGGACGTGGAGCTCTAATTGATGAGAAGGAATTGGTGAGGTGTTTGATGGAAGGGGAGATAAGAGGTGCTGGTAGTGAGATCAAAATTTACTCCTCTTGCGGCGGTAAAGCTGCATGCATCTATCTTCTCCAACCTCACTTGGTGGGAGCCTCAACCCCTTCACAATGCTTGTCATTTGATGATGAGAAGCATCAGGAAAATGTATTGATGGCAGAAAAGGATGAATTCATTTCACTATTGACTATGACTGTTATAGAAGGGAAATAATTGTTGCAGAGGTGCTTTGCTTTGTGAAAGGGAATATTAATCTCGGTGAATTCTGGTGAATGTATTCAAATTTTCAGAGAAAAGAACTTTCTTCTTGATTATGCCAACTTATAAGCTGCTACG 3873 0.4291 LKLKYLEWQRRSKPYRGCWLWGPQPALQLSNLSTLTSKRIGIIGLGSVGMEVAKRLGSFGCIILYNSKHKKATVSYPFYSSVVELATNCDALVVCCALNEQTKHIINREVILALGKGRFIVNVGRGGLIDEKQLVKCLREGEIGGAALDVFENEPYVPEELRAMNNVVLSPHCAAFTAESLMNLCELVAGNLEAFFLNKPLITPLNHQIKAMEEKHNHNDNKELQPLLVLGPPFMFPVFEAQNLHNYRFLNAFSSQLPLHQFLTEQNIEPSSIQAILCSPRQKVSADVIRLLPSLSLIMTTSNGTSHIDLAECSHRGIQVAPIPGDQLAVDIADMVVGLLIDVMWKISASDRHIRKWGSSKPCNLSSGSKLEGKRVGIIGLGRIGREVAKRLEAFGCKVMYNGRNEKPFVTYPFYSNVVELASNSDILVLSCSLNEQTRHIVNREVMLALGKEGIIVNIGRGALIDEKELVRCLMEGEIRGAGLDVFENEPNVPKELFPLDNVVLSPHAASLTSHRIYDDKTGPTAKKKIDRSTNSKSTEKKKITFKENPHGLWMSATGIKQCAEVANQKIINSTTLLELNHQAMTDKHKHNDDKKLQPILVFGPPLVFPTFEAQNLQNYHFLKAYSSQLPLHQFLAKQNVDPSSIQVILCNPHQKLSVDVIPLLPSLSLIVTTSAGTDHIDLAECSHRNIQVVSIAGEHAEDIADMTVGLLIDVIWKISATNRHVRKWGPSIPLNFSFGCKLEGKPVGIVGLGKIGVEVGKRLEAFGCKIMYNGRSQKPLVTYPFYSNVLELASNSDILVISCSLNEQTRHMVNREVMLALGKEGIIVNVGRGALIDEKELVRCLMEGKIGGAGLDVYENEPNIPKELIQLDNVVLSPHAASLTSNRLNSVCERVTERLEAFFSSKLPNILHFSGAQTPIAMVDKLQPLLVLGPPLILPILEAQYFHKYSFLKAFSSELPLHQFLSKQNVDPSSIQAILCNPLQQVSADVLRLLPSVSIIVTTSAGTDHIDLAQCSCLGIQVVCVPGDQADDVADMAIGLLIDVMMKISAAYRHFSKWGPSRPSNLYFGSKLKGRRVGIVGLGKIGKKVAKRLEAFDCRIMYHSRNEKPFITYPFYSNVVDLARNSDVLVLCCPLNEQTRRIVNREVMLTLGKDGVIVNVGRGALIDEKELVRCLMEGEIRGAGSEIKIYSSCGGKAACIYLLQPHLVGASTPSQCLSFDDEKHQENVLMAEKDEFISLLTMTVIEGK 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02313 1249 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 330 511 IPR036291 -
Pste6g02313 1249 Gene3D - 329 513 - -
Pste6g02313 1249 Gene3D - 701 885 - -
Pste6g02313 1249 FunFam Putative 2-hydroxyacid dehydrogenase 10 177 - -
Pste6g02313 1249 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 1040 1185 IPR006140 GO:0051287
Pste6g02313 1249 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 33 174 IPR006140 GO:0051287
Pste6g02313 1249 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 338 510 IPR006140 GO:0051287
Pste6g02313 1249 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 710 882 IPR006140 GO:0051287
Pste6g02313 1249 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 645 727 - -
Pste6g02313 1249 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 974 1039 IPR006139 GO:0016616|GO:0051287
Pste6g02313 1249 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 1078 1105 IPR029752 -
Pste6g02313 1249 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1032 1185 IPR036291 -
Pste6g02313 1249 MobiDBLite consensus disorder prediction 521 540 - -
Pste6g02313 1249 Gene3D - 633 907 - -
Pste6g02313 1249 FunFam Putative 2-hydroxyacid dehydrogenase 329 513 - -
Pste6g02313 1249 FunFam Putative 2-hydroxyacid dehydrogenase 701 885 - -
Pste6g02313 1249 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 645 907 IPR006139 GO:0016616|GO:0051287
Pste6g02313 1249 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 272 355 - -
Pste6g02313 1249 Gene3D - 7 176 - -
Pste6g02313 1249 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 975 1054 - -
Pste6g02313 1249 FunFam Putative 2-hydroxyacid dehydrogenase 1031 1191 - -
Pste6g02313 1249 Gene3D - 1065 1193 - -
Pste6g02313 1249 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 270 337 IPR006139 GO:0016616|GO:0051287
Pste6g02313 1249 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 19 175 IPR036291 -
Pste6g02313 1249 Gene3D - 952 1060 - -
Pste6g02313 1249 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 701 883 IPR036291 -
Pste6g02313 1249 CDD HPPR 225 515 - -
Pste6g02313 1249 CDD HPPR 598 905 - -
Pste6g02313 1249 Gene3D - 269 515 - -
Pste6g02313 1249 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 605 907 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02313 Pste-Chr6 11192340 11215242 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02313 6 11192340 11215242 Pste6g02313 6 11192340 11215242 ECH