Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02311 AAGCAATCTAGCAAAAGAAACTAAGAAGATTCTCTCATATCTGTTCCCCAAGGAATCCCCTTGGCTTTTTTCACCACCTTTCGTAACCTCTTCCTTTGTCTTTCCCAATAATAAGACTTGAAATATTAAACATGGTTGTTTCTCATCCTGCACTGGTAGTTGCACCTGAAAGCACCATAGCAAATGAAAAGGAAGCACAGAAACTAACGGTAGATGGATCTTTTACGGAAAACAAAAGCCACATGCCAACGGAGTTCGTGTGGCCTGATGAGGACAAAGCAGAAGAAGGAATTCCAGAATTGGATATTCCACCCATTGACTTGAAGGGCTTTCTCTCCGGAGACCAACAAGCTGTGGCAACAATCTGTCAGCGAGTCAATGAGGCATGCAAAAGGCATGGCTTCTTTCTTGCTGTCAACCATGGCGTTGATCCTAACCTCTTGGCTCGAGCTCATGCTCTCTCAGAGGAGTTCTTCTCCAGGCCTCATTCCGAGAAGCTCCAGCTTCAGAGAAAGTTAGGAGAAGCTTCTGGCTATGCTAACAGCTTCATTGGAAGGTTTGCTTCCAAGCTTCCTTGGAAGGAAACTCTTTCTTTCCAATTCATTCATGATACCAAAACTGTGCAAAACTATTTCCAAAATGTCAAGGATCAGGATTTCAGCCACTATGGGAAGTTGTACCAAGAATACTGTGAAGTCATGGGCGACCTGTCTCTTGTGATCATGGAGCTTCTGGGGTTGAGCCTTGGAGTTGGGAGGGATTTTTTCAGAGATTTCTACACAGGACATGATTCGGTTATGAGGTTGAATTACTACCCACCATGCCATCAACCTGAGTTAGCTTTAGGAACTGGGCCTCACAATGACCCTACTTCCCTAACCATTCTTCACCAAAATAACATCGATGGCCTCCAAGTCTTTGTTGATGGAAGATGGTACACTGTCTGTCCTAAAGGAGATGCTTTCGTTGTCAATATTGGCGACACACTTATGGCTCTGACGAATGGTATTTATAAGAGTTGCCTGCATAGAGCAATTGTGAACAACTCAGTGGCTAGAAGATCACTTACTTTCTTCCTGTGCCCAAATAAAGACAAAGTGGTCATCCCTCCAAAAGAACTCATAACCGCCGAGAATCCAAGACAATATCCAGATTTCACATGGGCAACTCTTCTTGAATTTACACAAAAACATTACAGGGCAGACACAACCACTCTTGAAGCTTTCAAGCAGTGGGTACTGGAGAAAAACAACTGAGCAGGGGCGTCCCCACAATTGTTCCATGGCCACCAAACCTATAAGCTGAGTGAGGAAGATGAAATCATACAAAGTGAAGGAGGCCAAGGTGCTTTTGGTGGGTCGATTATAAAAGAAATAACAGAAACCTCAAAAATAGAAGGGCTTCTACGTAATTAATTAGCTGTTCTGGTAGTGTTGGGAGAATCCAATAGGTGCCAATATATGAAAGAATAACTGAGGCCATATTCATAGGAATAAAGAGTTTATTTCTTTAGTTAAGTTATTCTCTGTTGTCACTAGTTTGCATTGTCAGTTGTCTTCAACTTTCTTTCTACTTATGTGTAATGCATGCATGTATGAACTCTGTTCAACTTTTAATTATATTAATAATAAACTGGGTTGCATGTTTTGTCGT 1653 0.4198 MVVSHPALVVAPESTIANEKEAQKLTVDGSFTENKSHMPTEFVWPDEDKAEEGIPELDIPPIDLKGFLSGDQQAVATICQRVNEACKRHGFFLAVNHGVDPNLLARAHALSEEFFSRPHSEKLQLQRKLGEASGYANSFIGRFASKLPWKETLSFQFIHDTKTVQNYFQNVKDQDFSHYGKLYQEYCEVMGDLSLVIMELLGLSLGVGRDFFRDFYTGHDSVMRLNYYPPCHQPELALGTGPHNDPTSLTILHQNNIDGLQVFVDGRWYTVCPKGDAFVVNIGDTLMALTNGIYKSCLHRAIVNNSVARRSLTFFLCPNKDKVVIPPKELITAENPRQYPDFTWATLLEFTQKHYRADTTTLEAFKQWVLEKNN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02311 374 PRINTS Isopenicillin N synthase signature 196 212 - -
Pste6g02311 374 PRINTS Isopenicillin N synthase signature 82 99 - -
Pste6g02311 374 PRINTS Isopenicillin N synthase signature 306 324 - -
Pste6g02311 374 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 59 347 - -
Pste6g02311 374 Gene3D - 25 357 IPR027443 -
Pste6g02311 374 FunFam Gibberellin 20 oxidase 2 30 356 - -
Pste6g02311 374 Pfam non-haem dioxygenase in morphine synthesis N-terminal 59 158 IPR026992 -
Pste6g02311 374 SUPERFAMILY Clavaminate synthase-like 25 358 - -
Pste6g02311 374 Pfam 2OG-Fe(II) oxygenase superfamily 220 318 IPR044861 -
Pste6g02311 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 218 318 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02311 Pste-Chr6 11183207 11185540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02311 18 356 Glycosyltransferase AT5G59530 29.598 2.37e-38 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02311 6 11183207 11185540 Pste6g02311 6 11183207 11185540 ECH