Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02299 atggacgatgtcttctccgtcggcaacgtcgaactcattgacaatactgcctaccatcgtggccgccgcggccgccccaagaagcacctcggtcactccgataagcccctctctctcgctgcgggccgccgcctcgcccgccccctcgacaatggcgggggagacttctctgttcccggcgacattggggtgtccccagccgtggcgatggaggcggacccggaggtgtgggaggccagggtgcttccagctatggactcggtagttaaggtgttctgcgtccacacggagccgaatttctctctcccgtggcagaggaagaggcaatacagctcgagtagcagcggatttgtgattggtgggagaagggttctcacaaatgctcattcagttgaacactatacacaggttaagctcaagaaacgtggctctgataccaagtacttggccactgtgcttgccattggaaccgaatgtgacattggaggatacttgtgtgaaataacagagccttgtcccactggcattaggttagccatgcttactgttgatgatgacgagttttggcaagggatgtcacctgtagaatttggagaattgcccacacttcaagatgcagttactgttgtgggctatccaattggtggagacactatctctgtgaccagtggtgttgtatcacgcattgagattctatcttatgtccatggttctacagaacttctaggtttacagatagatgctgctataaattctggcaattctggtggacctgcatttaatgataaaggaaaatgtgtggggattgcatttcagtccctcaagcatgaagatgtggagaatataggttatgtcattccaacgccagttatcatgcatttcatccaggattatgagaagaatggaggatatactgggttccctattcttggggttgagtggcagaaaatggaaaatcccgacctgcgaatggcaatgggcatgagatctgatcagaaaggtgtgcgcattagaagaattgatcccacttctccggaatccaagtttttaaagccatcagatgttatccttagttttgatggggttgatattgctaatgatggaacagttccatttcgtcatggagagcgcattggtttcagttatctcatatcacagaaatataccggggatcatgcagcaatcaaagtactgcgaaattcagacattttcaaatttgacattaagctcaatagtcacagaagacttattcctgcacacagcaagggcaagcctccctcatattatatcattgctggatttgttttttcaactgtttcagttccatatcttcgttccgagtatggaaaggattacgaatatgaagctccagtgaagcttttggataagctgctgcattccatgccacaattaccggatgaacaacttgttgtggtctctcaggtgctggtggctgatatcaacattggatatgaagatattgttaacacccaggtacttgctttcaatggtaaacctgtgaaaaacttgaagagcttggccactatggtagagagctgcgatgatgaatatctaaaatttgatctagaatatgatcagatagtggtccttcgcacaaagactgcaaaagcagctacacttggtattcttgccacacactgtattccatcagccatgtctgatgatcttaagtcatga 1698 0.0 MDDVFSVGNVELIDNTAYHRGRRGRPKKHLGHSDKPLSLAAGRRLARPLDNGGGDFSVPGDIGVSPAVAMEADPEVWEARVLPAMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIGGYLCEITEPCPTGIRLAMLTVDDDEFWQGMSPVEFGELPTLQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGGYTGFPILGVEWQKMENPDLRMAMGMRSDQKGVRIRRIDPTSPESKFLKPSDVILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDHAAIKVLRNSDIFKFDIKLNSHRRLIPAHSKGKPPSYYIIAGFVFSTVSVPYLRSEYGKDYEYEAPVKLLDKLLHSMPQLPDEQLVVVSQVLVADINIGYEDIVNTQVLAFNGKPVKNLKSLATMVESCDDEYLKFDLEYDQIVVLRTKTAKAATLGILATHCIPSAMSDDLKS 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02299 565 FunFam protease Do-like 9 190 300 - -
Pste6g02299 565 CDD PDZ_serine_protease 308 408 - -
Pste6g02299 565 Gene3D - 67 162 IPR043504 -
Pste6g02299 565 SUPERFAMILY PDZ domain-like 333 415 IPR036034 GO:0005515
Pste6g02299 565 Pfam PDZ domain 310 410 IPR001478 GO:0005515
Pste6g02299 565 Gene3D - 303 415 IPR036034 GO:0005515
Pste6g02299 565 PRINTS HtrA/DegQ protease family signature 349 361 IPR001940 GO:0004252|GO:0006508
Pste6g02299 565 PRINTS HtrA/DegQ protease family signature 116 128 IPR001940 GO:0004252|GO:0006508
Pste6g02299 565 PRINTS HtrA/DegQ protease family signature 203 227 IPR001940 GO:0004252|GO:0006508
Pste6g02299 565 PRINTS HtrA/DegQ protease family signature 240 257 IPR001940 GO:0004252|GO:0006508
Pste6g02299 565 Gene3D - 189 300 IPR043504 -
Pste6g02299 565 Pfam PDZ domain 417 562 IPR041517 -
Pste6g02299 565 Pfam Trypsin-like peptidase domain 115 269 - -
Pste6g02299 565 PANTHER - 81 563 - -
Pste6g02299 565 SUPERFAMILY Trypsin-like serine proteases 80 302 IPR009003 -
Pste6g02299 565 Gene3D - 416 565 IPR046449 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02299 Pste-Chr6 11053213 11059584 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02299 6 11053213 11059584 Pste6g02299 6 11053213 11059584 ECH