Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02292 AACACAACACAACACAACACCACACCACATATAACGCCCCAGCACAACACACGGCAGTGGTCACTCCCCTTTCACCTTTCCTTTTCTTTTCGTCGCCACGTCTCAGGCGCACGCGCACACTCGCTCTACACTATATTTAACACGCGCCTCCTTCACCACCACCACCGCACATGGCGGACGCCGACCTCACCGCCCCTCTCCTCTCCCGACCACGTCATCGTCACTGTCCACTCCTCTGCCCCCTCCGCCGCCCCCGGCAACCCATTCCACGCCCTCGGCTGCCACGCCGACCTCTCCGTGCCGCCGCCGCCCACCCTCGACCCCTTCCGCAACGCCACGCCCGCCGTGGAGGGGCTCTATGAGTGGGCCAAGACGGTGCTGTGTCTGCCGCTGGCGCTTCTGAGGCTCGCCCTGTTTGGCCTCTGTCTCGCGGTGGGGTTCGTGGCCACGAAGGTGGCGCTCGAAGGGTGGAAGGATAAGGAGAATCCGATGCCTAAGTGGAGGTGTAGGGTTATGTGGATCACGCGTTTGTGCGCCAGATGTATTCTCTTCTCCTTCGGATATCAGTGGATAAAAAGGAAAGGAAGACCTGCACCAAGGGAAATTGCTCCAATAATTGTATCTAATCATGTCTCTTACATTGAGCCTATATTCTATTTCTACGAATTATTTCCTACCATTGTGGCATCTGAGTCTCATGACTCCATACCTTTTGTTGGCACCATTATTAGAGCAATGCAGGTAATATATGTTAACAGATTCGTAACATCATCCAGGAAGCAAGCTGTTAGGGAAATAAAGAAATCTGCTTTCAAGGAACTGAATAACAGAGAAGGGCTTCTTGCAATAAATTTCCTCAAGTACTATTATTTCCTGAGGGAACGACAACTAATGGCAGAAACCTTATCTCCTTCCAACTTGGTGCATTTATCCATGGATACCCAATCCAGCCTGTTATTGTGCGCTATCCTCATGTGCACTTTGACCAATCCTGGTAGGAATTTGGGTAATGTTTCTTTGGGAAAGCTTATGTTCAGAATGTTTACTCAATTCCACAACTTTTTTGAGGTAGAATATCTTCCTGTCATTTATCCCCTGGATGATAAGGAAACTGCTGTACATTTTCGGGAGAGGACTAGTTGTGCTATTGCAACTGCAATGAATGCTGTCCAGACAGGACATTCTTATGGAGACATAATGCTTTATATGAAAGCACTAGAAGCGAAACAGGAGAATCCCTCAAGTTATATGGTTGAAATAACCAAGGTGGAATCATTATTTCATATCAGAAGCATGGAAGCTTTGGACTTTCTAGATAAATTCTTGGCCATGAATCCTGATCCCAGTGGTCGAGTTCAATATCATGACTTCTTGAGGGTTTTAAGACTTAAGGCTTGCCCCCTATCTGCAAAGATATTTTCATTCATTGATGTGGAGAAGAGTGGGACAATTACATTCAGACAGTTCTTGTATGGATGTGGCTATGTCATGTCCCAACCAGGGTTCCATCAAGCCTGTGAAGAATCCTTTACTGGGGTTGGTGGTGCAGTAAAGGCCTATATTGTTGAACAAGAGTTACGAGATTTCATCCAACCTGCTATCCTCAACTGGAATGAGGATGAGGTCCATGAGCTTTTTATGCTATTTGATAACGATAATGATGGAAGAATTGACAAGAATGACTTTCTTTCATGCCTTAGAAGTAATCCTCTTCTCGTAGCGTTTTTTACATCTCAACTGCAGCAAAAGGAATTTAATGCTAATGGAGTGATAGAGATAGTGTGATGGGTGGAATTCACCTTTTGATGAAATAGTCTGGCATTTTAGAATGTTGTCTATTGTGGACTACAAAGAAAAGAAATGGGTAGGGATTTCTGGGGAATACATAGAAGTATAGGATGCAGTGGCCTTATTTTTTTACCTTGGTTTGATTAATCGCTCATAAAGTTTAACTATTTGTTGAAAACCTCTGCCATCCATCCTCCTCTATTTTATATATATATATATATATATATATATATATATATATTTAACTATAGGTCAGTTTTGCACAGCTAGATGTCAGTTACCTGGGTGTTGTGATCTCACTGATCCAACATTTAAGTTTTTGGTTCAGGGACCATACGGACATTTAGGCTCAATGTCGGTTCATGTAAAGTTTGAACCAGCGTGTCAATTTGTAACAAACATTATAACTGTATTTTCAAAGATGTGAACATGAAGAAAG 2227 0.4396 NTTQHNTTPHITPQHNTRQWSLPFHLSFSFRRHVSGARAHSLYTIFNTRLLHHHHRTWRTPTSPPLSSPDHVIVTVHSSAPSAAPGNPFHALGCHADLSVPPPPTLDPFRNATPAVEGLYEWAKTVLCLPLALLRLALFGLCLAVGFVATKVALEGWKDKENPMPKWRCRVMWITRLCARCILFSFGYQWIKRKGRPAPREIAPIIVSNHVSYIEPIFYFYELFPTIVASESHDSIPFVGTIIRAMQVIYVNRFVTSSRKQAVREIKKSAFKELNNREGLLAINFLKYYYFLRERQLMAETLSPSNLVHLSMDTQSSLLLCAILMCTLTNPGRNLGNVSLGKLMFRMFTQFHNFFEVEYLPVIYPLDDKETAVHFRERTSCAIATAMNAVQTGHSYGDIMLYMKALEAKQENPSSYMVEITKVESLFHIRSMEALDFLDKFLAMNPDPSGRVQYHDFLRVLRLKACPLSAKIFSFIDVEKSGTITFRQFLYGCGYVMSQPGFHQACEESFTGVGGAVKAYIVEQELRDFIQPAILNWNEDEVHELFMLFDNDNDGRIDKNDFLSCLRSNPLLVAFFTSQLQQKEFNANGVIEIV 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02292 594 CDD EFh 471 563 IPR002048 GO:0005509
Pste6g02292 594 ProSitePatterns EF-hand calcium-binding domain. 550 562 IPR018247 -
Pste6g02292 594 ProSiteProfiles EF-hand calcium-binding domain profile. 537 572 IPR002048 GO:0005509
Pste6g02292 594 CDD LPLAT_LPCAT1-like 179 400 IPR045252 GO:0008374
Pste6g02292 594 Pfam Acyltransferase 201 268 IPR002123 GO:0016746
Pste6g02292 594 Gene3D - 414 592 - -
Pste6g02292 594 SMART efh_1 468 496 IPR002048 GO:0005509
Pste6g02292 594 SMART efh_1 541 569 IPR002048 GO:0005509
Pste6g02292 594 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 338 414 - -
Pste6g02292 594 SMART plsc_2 204 331 IPR002123 GO:0016746
Pste6g02292 594 SUPERFAMILY EF-hand 433 576 IPR011992 -
Pste6g02292 594 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 177 253 - -
Pste6g02292 594 Pfam EF-hand domain pair 525 567 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02292 154 408 Acyl Lipid Metabolism Gene Families AT1G80950 23.239 8.98e-11 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02292 6 10987960 10997996 Pste6g02292 6 10987960 10997996 ECH