Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02291 atgatggggacgacaaggagacccctttctcacacagttcgagtgtttaacataccccaatcagccaccgccaaggacctcctcgacttcctcgaatccacggtgggtccttccaccgtcttcgccctcgaaatattctccgacaaccccaactggaagtcccgcggctccggccgcatccagttcgagaccgccgacgccacttccctcgccctctctctctcccgcctcgatcaactcctcttcctctcccacttcctccgcctctccgaaacctccgatgacatcatcttccgccccctccaccgcctccaaaacggcgtcctctacgccggtttcatgctctccgatcactgcatgagcgtcctcgactcctgggagggcgtcaccggccgggtcatgccccaaaggaagagacttgacttctgggtgtcgcacaatcacgagtgtttcagactcgagattttgtttgaggacattttggagtctcatgggtattgtttgggggaagatgttaacctcaatgccatcctcttcgagctgaaatttgcaccaaggatttataagaaaaaggtggggccagatgtgacaaccaagtttaggagtgataggtaccgtttctgtaaggaagattttgaatttctttgggtgcgcactactgacttttcagctctgaagtcaattgggcactccacttcattttgttgggaaattgaggaagaacatttagcttcagatgtttttacaagtttcccgctctacaaggaaaatttgagagatctagctctggaagacggggaagaattctgttgtcccacagaagcagttccacttgtaaagtgttcttcgcaagccaagttaccttatgaggctcttttccagctgaattctcttgttcatactcagaaaattagtcttgcttcagtggatgatgaattgattgacttgttagctggcttagacgaagaaagtagagctgttatttttcagaaattgcacaagatgagcttcacttgttatgagcctctcaaatttgtcaagactcaattgcatgtgctgagtaacaaaaaaagaagcccttcacaatcaatgcagaaaaggttgacagataataacattatgagctgccatagagccttaattactccaacaaagatttattgccttggtcctgagcttgaaacctcaaatcatgtggtaaagcactttgcatcatatgcttcagacttcatgaggattacctttgtagaagagaactggaataagcttccaactaatgcagtatccactggtgtgcaaaagggaatcttttcaaagccttcgaaaactgaaatatacaagcggatcttgactattcttcgtgatgggattgtaattggatcgaagagatttgagttcctggccttctctgctagtcagttgcgatcaaattctgtttggttatttgcttctaatgacaatgtgaaagcagctgatatcagagaatggatgggatgctttaacaatattcgaagtgtttctaaatgtgctgcaaggatgggtcagttgttcagttcttccatgcaaacttttgaagtgccccctcaagatgtggagataattccagatattgaagttacctctgatgttgtaagctactgtttctcggatggtattggaaaaatttcccaatcttttgctaggcaagttgctcaaaagcttaaattggatcatagtccatccgcatttcaaattcggtatggaggatataaaggtgtcattgctgttgatcgccattcctttaggaagttatcgttgcgtagcagcatgctcaagtttgaatccaaaaacaggatgctttgtgtcactaaatggagtgagtcaatgccttgctttctcaatcgagaaattatatcccttttatctaccttaggagtaaaagatgaggtgtttttggcaatgcaacaggaccaattgcgtttgttagaaaggatgttaactgatagtaaggcggctttggatgttttggaatgtttaaatggagctgattcaaagagcattctagtgaagatgttgtatgaatttaatgagccaaacagtgagccttacctaacaatgatgcttaaggcttattatgaataccaattatctgacttgaaaactagatgccgaatatttgttcccaagggtcgagtcctagtaggttgcttggatgaaactggtcttttgaattatggtgaagtatttgtccgcatatctgtgacaaaaactatggaaaaatttggagatgaaaaactaaggaaagtggatgggaatgatagcacatgtataatagtggggaaggtggtggtcacaaaaaatccttgtcttcacccaggagacgtcagagtccttgatgctatttacagtgaagaattagaggaaaagggtttgagggattgccttgtatttccacaaaaaggacgtaggagatgtgagctgcaggatgagggatacaatggaaaggggatgtcattagctaggctatcacagtatgacttgtcatctagattctag 2535 0.0 MMGTTRRPLSHTVRVFNIPQSATAKDLLDFLESTVGPSTVFALEIFSDNPNWKSRGSGRIQFETADATSLALSLSRLDQLLFLSHFLRLSETSDDIIFRPLHRLQNGVLYAGFMLSDHCMSVLDSWEGVTGRVMPQRKRLDFWVSHNHECFRLEILFEDILESHGYCLGEDVNLNAILFELKFAPRIYKKKVGPDVTTKFRSDRYRFCKEDFEFLWVRTTDFSALKSIGHSTSFCWEIEEEHLASDVFTSFPLYKENLRDLALEDGEEFCCPTEAVPLVKCSSQAKLPYEALFQLNSLVHTQKISLASVDDELIDLLAGLDEESRAVIFQKLHKMSFTCYEPLKFVKTQLHVLSNKKRSPSQSMQKRLTDNNIMSCHRALITPTKIYCLGPELETSNHVVKHFASYASDFMRITFVEENWNKLPTNAVSTGVQKGIFSKPSKTEIYKRILTILRDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDNVKAADIREWMGCFNNIRSVSKCAARMGQLFSSSMQTFEVPPQDVEIIPDIEVTSDVVSYCFSDGIGKISQSFARQVAQKLKLDHSPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSMLKFESKNRMLCVTKWSESMPCFLNREIISLLSTLGVKDEVFLAMQQDQLRLLERMLTDSKAALDVLECLNGADSKSILVKMLYEFNEPNSEPYLTMMLKAYYEYQLSDLKTRCRIFVPKGRVLVGCLDETGLLNYGEVFVRISVTKTMEKFGDEKLRKVDGNDSTCIIVGKVVVTKNPCLHPGDVRVLDAIYSEELEEKGLRDCLVFPQKGRRRCELQDEGYNGKGMSLARLSQYDLSSRF 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02291 844 PANTHER RNA-DEPENDENT RNA POLYMERASE 11 816 IPR007855 GO:0003968
Pste6g02291 844 Gene3D - 4 95 IPR012677 -
Pste6g02291 844 SUPERFAMILY RNA-binding domain, RBD 8 94 IPR035979 GO:0003676
Pste6g02291 844 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 11 94 IPR000504 GO:0003723
Pste6g02291 844 Pfam RNA dependent RNA polymerase 381 818 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02291 Pste-Chr6 10987392 10991504 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02291 6 10987392 10991504 Pste6g02291 6 10987392 10991504 ECH