Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02228 atgaataagattggaaacacttcacctttgaaggaaagatcactttcaatcaagaaagtaacaagttccatgagtccacaaagaaaccaaagcattggtccaaattttcctattgatggggtggttgacacttcctcaatttatcaacttcaagaaaatggttgtaacattcaaagtttttgccaatcatcatcaaaacaacgctttggattcaataataatgattctagagttgatttgcattatttagttggagagcagaagaaaaagttagagatagggaaaaaggaaatggagaacaagacacaaggggattctagcagtgaagcatcttccacaccgagtagattgtccattgataagaagatggataaaattcaattactaagtgcaaattgtgttgtttcacaaaaaccaagcaaaccatcacaaccgttggcccctaaaacaccaccagaatctagaccaaaaggaagaacccttcatgcaaaacctcctcttgataaaaataatgactcgagaaaacaaaatacaggagttatccaagtgaaaaaaaatgttcatggaagatcattatcacaaagtcagattgaatgtcccactagatcaatattggataagcctgacctgggacaagctttattaaaccaagcaagggacatgatttcatcaggaaataatccaacaaaagctcttgaattagctcttcaagcaaagaaattatttgagagggctgctgcatatggtaaaccgagtttggatctggccatgtgtttacatgttaatgcagtaatacattgcagtttgggccattttaaagaagcaattccaattgtagagcgctctattgagattcctattattgaggaaggtcaacaacatgccattgctaagtttgctggtcacatgcatctaggagacatttatgctatattgggtcagcttgagaaatcaattaagtgctacactgaagggttaaaagtacaaaggcaggttttgggagaaacagacccaagagttggtgaaacgtgtaggtatgtggctgaagctaactttcaagcattacaatttgatgaggcagaaaggttgtgccaaatggcgcttgatattcataaagcaaattgttcaccctcttcccttgaagaggcagccgataggaggttgatgggccttatatgtgaagcaaatggaaaacatgaaatagccttggagcatcttgttttggccagtatagcaatggttgcaaatggccaagatgtggaagtggcatctgttgactgtaacattggagacacatacttatccttggctagatacgatgaagccatatttgcgtatcagagagcattgacagtttacaagactaataaaggtgaaaaccatcctgcggtgggatcagtctttgtacgtttggctgacttgtattgcaggacatggaagataaaggaatcaaaattatattgcaagaatgcacttagtatttatgaaaatcccatgccaggggtccctccagaggagattgctaatggtcttatgaatgtctcagccatttacgagtcaatgaatgaactagaagaggcacttaagttacttcacaaggcattagagatttttaacggagtctctggccagcaaaacacaatagcaggaattgaagctcaaatgggggtcatgtactacatgttggagaactatattgaatcttataatgctttcaagaatgctgtgtcaaagcttcgtgctactggagagaagaaatcagccttttttggtactgttcttaatcagatgggacttgcttgtgtgcaactccattacttgggtgaggctgtagaattatttgaagaagcaaggatcattttggaacaagagaatggaccctatcatctcgaaacacttggagtatatggaaatcttgctggcacgtatgatgcaattggaaggctggatgaggcaattgaaattctagaaaagatcgtggtgatgagggaggacaagcttgggacagcaaatcctgatgttattgatgagaagaaaaggttggatgagttgttaaaggaaacaggcaaagttcgaaacagaaaaacaaagtcacttgagaaccttttctatgtcaatgctcctactataaacaaccttgtcgtcgaggcctga 2154 0.0 MNKIGNTSPLKERSLSIKKVTSSMSPQRNQSIGPNFPIDGVVDTSSIYQLQENGCNIQSFCQSSSKQRFGFNNNDSRVDLHYLVGEQKKKLEIGKKEMENKTQGDSSSEASSTPSRLSIDKKMDKIQLLSANCVVSQKPSKPSQPLAPKTPPESRPKGRTLHAKPPLDKNNDSRKQNTGVIQVKKNVHGRSLSQSQIECPTRSILDKPDLGQALLNQARDMISSGNNPTKALELALQAKKLFERAAAYGKPSLDLAMCLHVNAVIHCSLGHFKEAIPIVERSIEIPIIEEGQQHAIAKFAGHMHLGDIYAILGQLEKSIKCYTEGLKVQRQVLGETDPRVGETCRYVAEANFQALQFDEAERLCQMALDIHKANCSPSSLEEAADRRLMGLICEANGKHEIALEHLVLASIAMVANGQDVEVASVDCNIGDTYLSLARYDEAIFAYQRALTVYKTNKGENHPAVGSVFVRLADLYCRTWKIKESKLYCKNALSIYENPMPGVPPEEIANGLMNVSAIYESMNELEEALKLLHKALEIFNGVSGQQNTIAGIEAQMGVMYYMLENYIESYNAFKNAVSKLRATGEKKSAFFGTVLNQMGLACVQLHYLGEAVELFEEARIILEQENGPYHLETLGVYGNLAGTYDAIGRLDEAIEILEKIVVMREDKLGTANPDVIDEKKRLDELLKETGKVRNRKTKSLENLFYVNAPTINNLVVEA 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02228 717 Gene3D Tetratricopeptide repeat domain 584 687 IPR011990 GO:0005515
Pste6g02228 717 SUPERFAMILY TPR-like 418 540 IPR011990 GO:0005515
Pste6g02228 717 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 39 706 - -
Pste6g02228 717 Gene3D Tetratricopeptide repeat domain 409 583 IPR011990 GO:0005515
Pste6g02228 717 Gene3D Tetratricopeptide repeat domain 201 408 IPR011990 GO:0005515
Pste6g02228 717 SMART tpr_5 508 541 IPR019734 GO:0005515
Pste6g02228 717 SMART tpr_5 549 582 IPR019734 GO:0005515
Pste6g02228 717 SMART tpr_5 423 456 IPR019734 GO:0005515
Pste6g02228 717 SMART tpr_5 633 666 IPR019734 GO:0005515
Pste6g02228 717 SMART tpr_5 591 624 IPR019734 GO:0005515
Pste6g02228 717 SMART tpr_5 465 498 IPR019734 GO:0005515
Pste6g02228 717 SMART tpr_5 299 332 IPR019734 GO:0005515
Pste6g02228 717 SMART tpr_5 341 374 IPR019734 GO:0005515
Pste6g02228 717 MobiDBLite consensus disorder prediction 135 178 - -
Pste6g02228 717 MobiDBLite consensus disorder prediction 93 117 - -
Pste6g02228 717 Pfam Tetratricopeptide repeat 422 496 - -
Pste6g02228 717 Pfam Tetratricopeptide repeat 592 659 - -
Pste6g02228 717 Pfam Tetratricopeptide repeat 303 330 IPR019734 GO:0005515
Pste6g02228 717 ProSiteProfiles TPR repeat profile. 423 456 IPR019734 GO:0005515
Pste6g02228 717 SUPERFAMILY TPR-like 228 669 IPR011990 GO:0005515
Pste6g02228 717 MobiDBLite consensus disorder prediction 155 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02228 Pste-Chr6 10605465 10609442 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02228 6 10605465 10609442 Pste2g00831 2 8911119 8915218 ECH
Pste6g02228 6 10605465 10609442 Pste6g02228 6 10605465 10609442 ECH
Pste6g02228 6 10605465 10609442 Pste2g00831 2 8911119 8915218 PCT