Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02184 CTGTTATACTTATATATTTTTCTTTTTTTTCCCTCTGTGGAATAGCATACATGTATAGATTTTCAAATTAAAATGACATTGCAAGCATAGAACGTGCTCCTTATTCCTGCAGTTTTAACATCAAAGTTCCAATTGACAATGGAAGAAGCTCAACAAAGGTATGCAGTTGTGACTGGAGCAAATAAAGGAATTGGATTGGAGATAGTTAGACTATTAGCTTCAGCTGGGATCAATGTGGTGCTGACAGCAAGAAATGAAAAGAGGGGTCTTCAAGCATTGGAAACAATCAAAGCCTCTGGTCTATCGCACCTTGTAGTGTTTCATCAGCTAGATGTGGCTGATGCTGCAAGTGTAGCTTGTCTGGCAGATTTTATCAAATCCAAATTTGGAAAACTTGATATTCTGGTTAACAATGCGGCGGTAGGAGGAATTGAAATTAAAGACACAGATCTATACGTTTTAGTAATCGTTAAACATGGGGATGTATCAAAAGAGAATCTGAACAAGGCAACGACTCAAACATATGAATTAGCTGAAGATTGCTTTCAAATAAATTACTATGGGGTTAAAAGAACAACTGAATCCCTTCTTCCTCTCCTCTTGTTATCCGATTCACCAAGAATTGTGAATGTATCCTCCTCGCTGGCGAAATTAGAGAACATATCAAATGAACATGCTAAAGGAATCTTGAGTGATGTTGATAAGCTGACAGAAGAGAATTTGGATGAAGTATTGAAGGAGTTTCTCAAAGATTTTGAAGAAGGTTCATTAGAAAGCAAAGGTTGGCTTAGCTATATGAGTGCCTATAGTGTCTCTAAAAGTGCTGTGAATGCCTATTCAAGGGTTATTGCTAAGAAATACCCTAAAATCTGCATTAACAATATTTGCCCTGGTTATGTTAAGACAGATATGACCAACAATACTGGGATTTTGACAGCAGAAGAAGGTGCTGCTAGTATTGTGAGATTAGCACTACTTCCCAATGGTAGTCCATCTGGTCTCTTCTATTTCCAAAACGAAGTCTCTTCCTTTTGATTTTCACAGCAGAAGAAGCTGCCTATAAATTCTCTGCTGAAGTACTTACTTTCTATAATAGTATGCTTTATAATAGGACTTAATTACATGTGTCTCTCTATTTTCTTTTAATTTG 1150 0.3661 MEEAQQRYAVVTGANKGIGLEIVRLLASAGINVVLTARNEKRGLQALETIKASGLSHLVVFHQLDVADAASVACLADFIKSKFGKLDILVNNAAVGGIEIKDTDLYVLVIVKHGDVSKENLNKATTQTYELAEDCFQINYYGVKRTTESLLPLLLLSDSPRIVNVSSSLAKLENISNEHAKGILSDVDKLTEENLDEVLKEFLKDFEEGSLESKGWLSYMSAYSVSKSAVNAYSRVIAKKYPKICINNICPGYVKTDMTNNTGILTAEEGAASIVRLALLPNGSPSGLFYFQNEVSSF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02184 298 Pfam short chain dehydrogenase 217 261 IPR002347 -
Pste6g02184 298 Pfam short chain dehydrogenase 8 174 IPR002347 -
Pste6g02184 298 PRINTS Glucose/ribitol dehydrogenase family signature 242 259 IPR002347 -
Pste6g02184 298 PRINTS Glucose/ribitol dehydrogenase family signature 223 242 IPR002347 -
Pste6g02184 298 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Pste6g02184 298 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Pste6g02184 298 PRINTS Glucose/ribitol dehydrogenase family signature 154 170 IPR002347 -
Pste6g02184 298 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 296 - -
Pste6g02184 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 284 IPR036291 -
Pste6g02184 298 FunFam (+)-neomenthol dehydrogenase 2 298 - -
Pste6g02184 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Pste6g02184 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 223 242 IPR002347 -
Pste6g02184 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 IPR002347 -
Pste6g02184 298 Gene3D - 1 298 - -
Pste6g02184 298 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 210 238 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02184 Pste-Chr6 10339066 10341419 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02184 1 263 Acyl Lipid Metabolism Gene Families AT1G24360 21.805 1.43e-09 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02184 6 10339066 10341419 Pste6g02184 6 10339066 10341419 ECH