Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02164 ATGGTTGATAACGATCCGATCAGCCAAATGAACCTCGAGGTTGTCACCCTTTCCGCTGGTGCTCATTTCCTTTCTATTGGTTCGTGCTTGTTTTCGCAATGGAGAGCTCTCGATCTTGGCACGAGGTATGCTGTTGTCACAGGAGCAAATAAGGGAATTGGGTTTGCAATATGCAAGCAATTGGCTTCTAATGGGAACACTGTTGTGCTGACAGCCAGAGACGAGAAAAGGGGTCATCAAGCTGTTGAGAAACTCAAAGAGCTTAGTCTCCCTGGCCATGTGCTCTTTCATCAACTTGATGTTGCAGACCCTGCAAGTAGAGGAGCAGTTGCAGATTTCATCAGGAACCTATGTGGAAAACTGGATATCTTGAAAACTGCTGGCCGTGTTGATTGGAGCAAAATAGTAACTGAAACCTATGAATTAACTGAAGCAGGGCTTAAAACAAACTACTATGGACCTAAGGAATTGACCAAAGAACTTATTCCTCTTCTCCAGCTTTCAGATTCCCCAAAAATTGTGAATGTTTCCTCATCCATGGGAAGACTAGAGCATATACCGAATGGATGGCCTAAAGAAGTACTTAGTGATGTTGAAAACCTTACAGAAGAAAAGATTGACGGCCTTTTGAATGAATTTCTGAAGGATTATAAAGAGGGTTCATTAGAAACCAAAGGGTGGCCTCTTGCTATGCCTGCATATAGTGTCTCAAAAGCTGCTCTGAATGCATACACAAGGATTCTGGCCAAAAAGTACCCCTCATTCTGCATCAATGCTATTTGTCCTGGTTATGTGAAGACTGATATAAACTGCAATACTGGTTTTCTAACACCTGATGAAGGTGCTGAACCTGCATGTTGTCGAATCGTACCAACTGTTAAACTGTATATTGTTAGTTCAAGTATGAAGAAAATGGCACTGAGTGATGTTGAAAACCTTACAGAAGAAAAAATAGATGATATTTTGAACAAATTTGTGGAGGATTCAAAAGAGGGATCATTAGAAACCAATGGTTGGCCCTTTATGTTGCCTACATATACTGTCTCAAAAGCTGCTCTAAATGGCTACACGAGGATTTTGGCCAAAAAGTATCCATCATTCTGCATCAATTCTGTTTGTCCTGGCTTTGTGAAAACAGATATGAGCCATAATACTGGTGTTCTATCTCCTGATGAAGGTGCTGAAGCTGTAGTAAGGTTGGCATTGCTACCTGATCATGGTGGTCCTTCTGGCCTCTTTTTCTACCGAAATGAAGAAAAATCATTTTGA 1269 0.4121 MVDNDPISQMNLEVVTLSAGAHFLSIGSCLFSQWRALDLGTRYAVVTGANKGIGFAICKQLASNGNTVVLTARDEKRGHQAVEKLKELSLPGHVLFHQLDVADPASRGAVADFIRNLCGKLDILKTAGRVDWSKIVTETYELTEAGLKTNYYGPKELTKELIPLLQLSDSPKIVNVSSSMGRLEHIPNGWPKEVLSDVENLTEEKIDGLLNEFLKDYKEGSLETKGWPLAMPAYSVSKAALNAYTRILAKKYPSFCINAICPGYVKTDINCNTGFLTPDEGAEPACCRIVPTVKLYIVSSSMKKMALSDVENLTEEKIDDILNKFVEDSKEGSLETNGWPFMLPTYTVSKAALNGYTRILAKKYPSFCINSVCPGFVKTDMSHNTGVLSPDEGAEAVVRLALLPDHGGPSGLFFYRNEEKSF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02164 422 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 340 417 IPR036291 -
Pste6g02164 422 Gene3D - 33 290 - -
Pste6g02164 422 Gene3D - 291 422 - -
Pste6g02164 422 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 41 287 IPR036291 -
Pste6g02164 422 PRINTS Glucose/ribitol dehydrogenase family signature 119 130 IPR002347 -
Pste6g02164 422 PRINTS Glucose/ribitol dehydrogenase family signature 253 270 IPR002347 -
Pste6g02164 422 PRINTS Glucose/ribitol dehydrogenase family signature 43 60 IPR002347 -
Pste6g02164 422 PRINTS Glucose/ribitol dehydrogenase family signature 165 181 IPR002347 -
Pste6g02164 422 PRINTS Glucose/ribitol dehydrogenase family signature 234 253 IPR002347 -
Pste6g02164 422 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 42 284 - -
Pste6g02164 422 Pfam short chain dehydrogenase 341 384 IPR002347 -
Pste6g02164 422 Pfam short chain dehydrogenase 43 183 IPR002347 -
Pste6g02164 422 Pfam short chain dehydrogenase 230 270 IPR002347 -
Pste6g02164 422 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 221 249 IPR020904 GO:0016491
Pste6g02164 422 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 333 361 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02164 Pste-Chr6 10246051 10254158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02164 44 280 Miscellaneous Gene Families AT2G29150 27.273 6.42e-07 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02164 6 10246051 10254158 Pste6g02164 6 10246051 10254158 ECH