Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02162 atgcagtctttgtcatcaagtatgagtctgaggagcagtagtttagcgaattttctgttgctgggttcggagacgactagggtgagaagaaagagtatcatcgtagcctgtgcttctgagggagacagtagcaccagcagctcctttctctctcggacccaaacctacgcccttcttaagcaacaattgcaagtagctgctaagtccgaggattataaggaagcagcgagaattcgagactcgttaaagttgtttgaggaggaggagcctgttttgcgtctcaggagactattgaaggaagcaattgctcaggagagatttcaggatgctgctagttatcgtgatgagctaaaaaaaattgccccacactctcttttaaaatgttgcagtgatgctacaacattgggaatccaggttcaagttaggagtgtatatatagagggcagaagtcagccttcaaaggggctatacttctttgcatatagaataagaattaccaataactcagaacaccctgttcaacttcttagaaggcattggattataactgatgctaatgggagaacggaaaatgtctggggaattggagttgttggtgaacaaccattaatacttcctgggaatagttttgaatactcttcagcatgcccactgaacacaccaaatggtagaatggaaggtgactttgagatgatccatgttgaaagagtaggctcacgatcattcaatgtggccattgccccgttttctctctcactgcttggagatgatgaaggttgtataacttga 789 0.0 MQSLSSSMSLRSSSLANFLLLGSETTRVRRKSIIVACASEGDSSTSSSFLSRTQTYALLKQQLQVAAKSEDYKEAARIRDSLKLFEEEEPVLRLRRLLKEAIAQERFQDAASYRDELKKIAPHSLLKCCSDATTLGIQVQVRSVYIEGRSQPSKGLYFFAYRIRITNNSEHPVQLLRRHWIITDANGRTENVWGIGVVGEQPLILPGNSFEYSSACPLNTPNGRMEGDFEMIHVERVGSRSFNVAIAPFSLSLLGDDEGCIT 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02162 262 PANTHER OS05G0170800 PROTEIN 38 258 - -
Pste6g02162 262 Pfam ApaG domain 149 232 IPR007474 -
Pste6g02162 262 ProSiteProfiles UVR domain profile. 88 123 IPR001943 GO:0005515
Pste6g02162 262 Pfam UvrB/uvrC motif 93 120 IPR001943 GO:0005515
Pste6g02162 262 ProSiteProfiles UVR domain profile. 53 88 IPR001943 GO:0005515
Pste6g02162 262 Hamap Protein ApaG [apaG]. 130 262 IPR023065 -
Pste6g02162 262 ProSiteProfiles ApaG domain profile. 131 258 IPR007474 -
Pste6g02162 262 SUPERFAMILY ApaG-like 133 252 IPR036767 -
Pste6g02162 262 Gene3D ApaG domain 127 256 IPR036767 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02162 Pste-Chr6 10237411 10240974 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02162 6 10237411 10240974 Pste6g02162 6 10237411 10240974 ECH
Pste6g02162 6 10237411 10240974 Pste2g00770 2 8142828 8145925 PCT