LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste6g02116	TGTGATAGAATAAAATGACTATTGTTCTCCGTTTCTGCACAACACTATGCAAACACTCTGTTCTTCACTTGGAGATTGCACTCTTGCCGTGCCCAGATTCCCAATCAATGCCGCTCCTCCAAATTTTGCATCTTTTTTGTCCACTCTAAGCCCCTCGAACGATGGAATAAAATCGAGTTTGACTTTTGGTTGTGGGATTCTCAAACCACTTAGGAAGAGTAGGTGTGACGGTTTTGGGGTCAAGTGTGCAGCCTCCAATGATGATGGATTTTACATAAGAAAATGTGTAGAGCTTGCAAGAAAGGCTGTTGGGTTTACCAGCCCCAATCCATTAGTGGGGTGTGTTATTGTAAAGGATGGGAAGGTTGTTGGTGAAGGCTTCCACCCTAAAGCAGGTCAACCTCATGCTGAGGTGTTTGCTCTGAGAGATGCTGGTGATTTGGCACAAAGTTCAACAGCTTACGTGAGCTTGGAACCTTGTAATCATTTTGGGAGGACTCCGCCTTGCACTGAAGCTCTAATTAAAGCAAAAGTGAAAAAGGTTGTTGTTGGGATGGTGGATCCAAATCCCGTAGTTGCTTTCAAAGGGGTGGAAAGATTGAGAGATGCAGGAATTGAAGTTGTTGTGGGTGTAGAGGAAGAGCTATGCAAGAGCCTCAATGAGCCTTATATTCATCGCATGTTGACTGGAAAGCCTTTCCTTACTTTGAGATATTCTCTTTCTGTAAATGGAAACCTTTTGGACTTACTTGGGAATGGAGTTGCAAGATGTGGTGGATACTACTCAAGGCTATTACAGGAATATGATGCAGTGGTAACCTCTTCTTCATTATTCGGTGAAAATTTGTCATTGCCTGCATCTCAAGAACCTGGAGCCAACCAACCAATTCGGATTGTAATCCATAAATATCCTAGTTCTTTAAATCTAATTCCACCAGCCTCCAATGAAGCTATTGGCAAAGTGATCATCTTTACAGACAATAAAACAGCAACAGCTCCAGCAGTGGCTCAACAAGGAATTGAAACTGTAGATCTGGATCAAATAAATCTGGATGTGATAATGGATTATTGTAATCGTCAAGGATTGTGCAGTGTTCTGTTAGATACTAGGGGGTGTTTCCATGAGTTTGAAGAGCTTATTAAGGAGGGTATCAAGAAGAACTATATTAATAAATTTGTTACAGAAATCTTGCCAGTTTGGGACAGATGTGCTGAGCCAGATCCTCTACGGACATTGAAGAGCTTAGAGCAAGGAGTGAAAGTGGTAAATTTGAAGTCCAAGGCCTCAGATCAGAGTGTAATAATCGAGGGGTATTTTAAACTTGAGTAAATGAGCTCACAGGTGCCCACAAACTTCCATTTATTAATCTTTCTGGATCCTGGTTTTTGCCAGGGCGTTATTTACTGTAGGCTAAAATTCAAAAGTAGTTCTTGAATTGTCAATAATGATCTTTATTTTCGTTTTTTGATGGGCTAACATTTAAGTTTTACTTGAAATTTAGATGAGATTGTACCATTCCGATTTTATATCTTGAAGTTGGGCCGTGTGTTTCATTAGGAATGTGATCTGTG	1572	0.4065	MQTLCSSLGDCTLAVPRFPINAAPPNFASFLSTLSPSNDGIKSSLTFGCGILKPLRKSRCDGFGVKCAASNDDGFYIRKCVELARKAVGFTSPNPLVGCVIVKDGKVVGEGFHPKAGQPHAEVFALRDAGDLAQSSTAYVSLEPCNHFGRTPPCTEALIKAKVKKVVVGMVDPNPVVAFKGVERLRDAGIEVVVGVEEELCKSLNEPYIHRMLTGKPFLTLRYSLSVNGNLLDLLGNGVARCGGYYSRLLQEYDAVVTSSSLFGENLSLPASQEPGANQPIRIVIHKYPSSLNLIPPASNEAIGKVIIFTDNKTATAPAVAQQGIETVDLDQINLDVIMDYCNRQGLCSVLLDTRGCFHEFEELIKEGIKKNYINKFVTEILPVWDRCAEPDPLRTLKSLEQGVKVVNLKSKASDQSVIIEGYFKLE	427

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste6g02116	427	NCBIfam	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	78	368	IPR004794	GO:0008835\|GO:0009231
	Pste6g02116	427	Pfam	Cytidine and deoxycytidylate deaminase zinc-binding region	75	170	IPR002125	-
	Pste6g02116	427	CDD	Riboflavin_deaminase-reductase	77	189	-	-
	Pste6g02116	427	Gene3D	Dihydrofolate Reductase, subunit A	211	424	IPR024072	-
	Pste6g02116	427	SUPERFAMILY	Cytidine deaminase-like	73	212	IPR016193	GO:0003824
	Pste6g02116	427	FunFam	Riboflavin biosynthesis protein RibD	70	210	-	-
	Pste6g02116	427	SUPERFAMILY	Dihydrofolate reductase-like	217	423	IPR024072	-
	Pste6g02116	427	ProSitePatterns	Cytidine and deoxycytidylate deaminases zinc-binding region signature.	120	158	IPR016192	GO:0008270\|GO:0016787
	Pste6g02116	427	ProSiteProfiles	Cytidine and deoxycytidylate deaminases domain profile.	71	193	IPR002125	-
	Pste6g02116	427	PANTHER	CYTOSINE DEAMINASE FAMILY MEMBER	63	208	-	-
	Pste6g02116	427	Gene3D	Cytidine Deaminase, domain 2	63	210	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste6g02116	Pste-Chr6	9992794	9995033	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste6g02116	6	9992794	9995033	Pste6g02116	6	9992794	9995033	ECH