Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02111 GTTGTTTTTTTTTTTTATTTCTATGGCTAGAGACTATAAGCAATTTTTTGGAGGCTGATATTTCATTATTCAACATATCAATTAAATGCTGGTCAGCTTGCACATGATTTCAGTCTACATTCTGTTTATTGAGATTGTAAGCTGATTGAAGTAAATTTAAAAAATGCCGAATCGTATGATTTGTGCACTGTCTTAATGTGATTGTTAAGCCATATAAATTGTACAGTGTTGGTCACACAACTTGATCTTGTTTGTTTCTACTCTCATACACACCCTTTGAGATTTGGATCTGCTATGATACTTCTTTTTATGATCATAATGGCCAGATGTTTGTTATACCATTTGCACACAAATGACTTGAAATAGCAAGTGAAGTTTTGATCTGATAACAGTTTTTATGAACGTTTACTCTTTCTTTTCAGGTCCTTTGTATGTACTATCCAATGGAGCATGTAGATGAGGGAAAAGAATCATCAAATAGTGTCAATGGAGTAGAAGCCAATAATTCTCCACTTATTTGTGGCCTTCCAGATGATCTTTCTCTTATGTGCCTGGCTAGAGTTCCTAGAAAATATCATTCAGTCCTGAAGTGTGTCTCAAAGGGATGGAGGGACTTAATTTGCAGTGAAGAGTGGTATTTTTATCGTCTAAAGCACAAACTTGATGAGACCTGGATTTATGCTCTGTGCAGGGACAAATTAAATGAGATTTTCTGTTATGTTTTGGATCCAACTGCCTCAAGAAGATATTGGAAGCTCATTGATGGTTTTCCACCTCATATCTCGAAAAGAAAAGGTGTGGGTTTTGAAGCTTTGGGAAATAAGCTATTCTTTTTGGGTGGTTGTAGCTGGTTAATAGATGCTACTGATGAGGTTTGTTCATATCATGCTTCCTCATACTGTTGGGATAAAGGTGCTTCCATGTCAACTGCTAGGTGCTACTTTGCTTGTGAAGTTTTGGACAAAAAACTATATGCTATCGGGGGATTAGTTTCAAATTCAAGTGACCATTCTTGGGATACTTTTGACCCTTTGACAAATTGTTGGACATTGCATACTGATCCTAATATTGGTTCTGTATCTTCTGAAATTGAAGATTCAGTGGTTCTTGATGGGAAGATATATGTCCGATATATTAGAGATCCTATAACTCCTCATGTATTTGCTGTTGTATATGAACCATCAAGTGGCACATGGCAGTATGCAGATGATGACATGGTTTCAGGATGGACAGGCCCTGCAGTTGTTGTTGATGGTACCCTTTATGTCTTGGATCAGAGTTTGGGAACTAGGTTAATGATGTGGCATAAAGAGAGACGCCAGTGGATACCTGTTGGAAAGCTATCACCATTGCTTACCAAACCACCTTGTCAGCTTGTTGCAGTCGGTAAAAGCATTTTCATTATTGGGAAAACCCTCAGCACTGTGGTTGTTGATGTTGGTGATTTGGGGAATGAGGGTCAAGTGATGATGAGTTCTTCTATACCTGAATTATTACCTGATTTCAATGTAATAAGTTGTAAATGCTTGTCAATCTAAAATATAGATTAATTTGTGTATTATGTTAAGATACCTGTATCATTGTTACATTATTATTTTTTCTTTACTTCGTATAATGGATATCAAGGTTTGACTTATGAC 1640 0.3646 MYYPMEHVDEGKESSNSVNGVEANNSPLICGLPDDLSLMCLARVPRKYHSVLKCVSKGWRDLICSEEWYFYRLKHKLDETWIYALCRDKLNEIFCYVLDPTASRRYWKLIDGFPPHISKRKGVGFEALGNKLFFLGGCSWLIDATDEVCSYHASSYCWDKGASMSTARCYFACEVLDKKLYAIGGLVSNSSDHSWDTFDPLTNCWTLHTDPNIGSVSSEIEDSVVLDGKIYVRYIRDPITPHVFAVVYEPSSGTWQYADDDMVSGWTGPAVVVDGTLYVLDQSLGTRLMMWHKERRQWIPVGKLSPLLTKPPCQLVAVGKSIFIIGKTLSTVVVDVGDLGNEGQVMMSSSIPELLPDFNVISCKCLSI 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02111 368 SMART fbox_2 32 72 IPR001810 GO:0005515
Pste6g02111 368 PANTHER OS02G0202900 PROTEIN 15 338 IPR045887 -
Pste6g02111 368 Gene3D - 77 343 IPR015915 GO:0005515
Pste6g02111 368 SUPERFAMILY F-box domain 26 75 IPR036047 GO:0005515
Pste6g02111 368 Pfam Kelch motif 167 206 IPR006652 GO:0005515
Pste6g02111 368 Pfam F-box domain 30 66 IPR001810 GO:0005515
Pste6g02111 368 SUPERFAMILY Kelch motif 93 328 IPR015915 GO:0005515
Pste6g02111 368 CDD F-box_AtAFR-like 28 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02111 Pste-Chr6 9965857 9969854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02111 32 309 Miscellaneous Gene Families AT4G33900 25.753 1.03e-15 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02111 6 9965857 9969854 Pste6g02111 6 9965857 9969854 ECH