Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02108 CTCCACCCGCCCATCTTTAGCCCTACACCGCCGCACACTCGATCCCACACCGTCCTACGCAGTATATATACCGTTCATAACTAAAGCCGAACAAACAGAATTCAATTTGAATTGCTCCGTTGAAAATCCGGAGAAATGGAATTGAATTGCTCCGTGAAAAAAATCGAAAACGAGAAAGGTCAGTTCCAATTAGCGAAAAGGAGAAATCATGAAATAATTTAAAGAAGATTTTCGGAGCTGAAAAGTTTTTCTTTTTTTTGTTTAAGCGTTGGGATTTTTGGTATTTGCAGCGTTTGAGTTTCTTGGATGCGTTCCTCTTCTGCAGAGGCTTCCTAGCTCGTCTGTTAGGAAGATATCTCAACTTGTGGATGTCAAACACTGCGAGCCAGGAGAGTATGTTGTTCGTGAGGGTGAACCTGGAGATGGCGTGTACTTCATATTTGATGGAGAGGCAGAGGTTGTGGGATCTGTTAGTGCAAATGCTGAAAATCGCCCAGACTTCTTATTGAAAAGATACGACTACTTTGGTTATGGTAGTTTGTCAAGCACAGTTCACCAGATAGATGTTATTGCTTTGTCTAAGCTGACATGCTTAGTGCTGCCTCATGAGCACTCAACACTGGTGCAGCAAAAGTCTATCTGGAGAGCAGAAAATTGTCTCGAGGCATGCTCATCTGTGGAGAATATATTGCATTTGGAACCCATGGAGGTAGATATCTTTCAAGGAATTACCCTTCCAGATGCTCCAAATTTTGGAAAGGTGTTTGGGGGCCAGATGATTGGACAGGCACTAGCTGCAGCTTCAAAATCCGTTGACTCTCTCAAGCTTGTTCATAGTTTGCATGCCTATTTTATTCTTGCGGGGGATTTGCGCATGCCAATTACATATCAAGTTCACCGTGTCCGTGATGGAAAGAGCTTTGCTACAAGGAAAGTGGACGGAATTCAAAAGGGAAATGTCGTGTTCACTTTGCTGGCTTCATTTCAAGTAGAAGAATCAGGGATGGTCCACCAGCAACTTCTGCCAATGGAAGAGCTACGGGAGAGACGTCTTACTGACCCTCGTTTACCAATAACCTACCGGAACAAAGTAGCCACAACTAAATTCATCCCCTGGCCCATTGAGATACGGTTATGTGAATATCAAACGGCAACAAATATGACAAAATCTCCTCCCTGTTTGCGATACTGGTTTCGAGCAAAGGGAAAACTTTCAGATGATCAAGCCTTGCATAGGTGTGTGGTGGCATATACTTCAGATCTAATATTTCTTCAAGTAAGTTTGAATCCCCACCGTGAGAAGGGTTTCAGGACACGTTCTGTTAGTCTAGACCACTCAATGTGGTTTCACCGATCCGTAAGAGCTGATGACTGGGTGCTATTTTCGATCTTTACTCCTAGTGCCCATAGTGCACGTGTCTTTGTCAACGGTCAAATGTTCAATCAGAAGGGAGAGCTTCTTGTAACATTGGTTCAAGAAGGACTAGCCCGGAAAATTAATCCCGGAAATTCATCCATTAAATCTAACTTGTGAATACACAGATTAGCATGTATCCATTTTATAGTTTTATTTAAAAAATGACATGTATCCATAACCTCTTAACATCTAAATTATATAGGTAAATTTAGGTGTTGTTATAAAATGTTTCTT 1651 0.4191 MEVDIFQGITLPDAPNFGKVFGGQMIGQALAAASKSVDSLKLVHSLHAYFILAGDLRMPITYQVHRVRDGKSFATRKVDGIQKGNVVFTLLASFQVEESGMVHQQLLPMEELRERRLTDPRLPITYRNKVATTKFIPWPIEIRLCEYQTATNMTKSPPCLRYWFRAKGKLSDDQALHRCVVAYTSDLIFLQVSLNPHREKGFRTRSVSLDHSMWFHRSVRADDWVLFSIFTPSAHSARVFVNGQMFNQKGELLVTLVQEGLARKINPGNSSIKSNL 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02108 276 Gene3D - 1 265 IPR042171 -
Pste6g02108 276 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 127 264 IPR029069 -
Pste6g02108 276 Pfam Thioesterase-like superfamily 19 261 - -
Pste6g02108 276 CDD Thioesterase_II_repeat1 160 261 - -
Pste6g02108 276 FunFam Acyl-CoA thioesterase II 1 266 - -
Pste6g02108 276 CDD Thioesterase_II_repeat2 4 96 - -
Pste6g02108 276 PANTHER ACYL-COA THIOESTERASE 2 264 IPR003703 GO:0006637|GO:0047617
Pste6g02108 276 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 6 100 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02108 Pste-Chr6 9956288 9964127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02108 1 276 Acyl Lipid Metabolism Gene Families AT1G01710 64.111 2.63e-139 397
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02108 6 9956288 9964127 Pste6g02108 6 9956288 9964127 ECH
Pste5g01445 5 9246192 9253737 Pste6g02108 6 9956288 9964127 PCT