Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste6g02097 | ATGGATAACTCATCCAACTTTGATGAAAACTCCGATGTGGGGTACCAACCTTCACCTTCTTCTGTGGATCAAAATGATCATTCAATCACTGAAACCGCTGGATTCTCCCCATTCAGTGGCGAATCCTTCGCATATTGCCGGACTAACTCGGAGGCCTCAAATTTCTCCGAGCCTATTGATGACAATAGCTTTGCAAGTGAACCTTCACCTTCTCTATGGACACCTGTGAAACATGGAGCTAGTCAAGCTGCTCTCTCAAGATTAGGAATGAAGCAGCACAGACACTCATTAGATGCTAAATCTGATGACCTTGACCTGTTGGAGTTAGAGCTTGATATGATGAGGGAAAGATTCTCTAAGCTTCTATTGGGGGAGGACATGTCCGGTGGTGGGAAAGGTGTCTGTACTGCAGTTACAATATCAAATTCAATTACCAATCTCTATGCAACTGTTTTTGGACAAAACTTAAAGTTGGAGCCTCTGAAGCCAGAGAAGAAGGCTATGTGGAAAAGAGAAATGACCTGTCTCCTATCTGTGTGTGATTACATAGTAGAATTTGCCCCGACTGCACAATATTTAGATGATGGTACAATTGTGGAGATGATGACAAGCAGGCCTAGATCAGATATTTATATCAACCTCCCAGCTCTGCAGAAGCTTGACACAATGCTCATGGAAATATTGGATAGTTTCCTGGATACTGAATTTTGGTATGCGGAGCAAGGGAGCGTATCAGGGAATTCAACTCGGTCACGTGGAGGCTCATTTAGGAGGATTGTTCAGAGGAAAGATGAGAAATGGTGGCTGCCAGTTCCTTGTGTTCACCCTGGGGGTCTCTCTGATAAGTCAAAGAAGCACTTGAGTGAGAAAAGAGACTGTGCTAATCAAATTCATAAAGCAGCTATGGCTATAAATAGCAGTGTTCTTGCAGAGATGGATATCCCAGAAACATATATGGCAAATCTTCCCAAGAGTGGAAGAGCAAGTCTTGGGGACACAATTTACCGCTATATGTATTCTGCGGACAAGTTCTCACCAGATCACCTTCTTGACTGTCTCAAAATAAGTTCTGAACATGAAGCACTTGAGCTGGCAGATAAGGTTGAGTCTTCAATGTTCACTTGGAGGCGAAAAGCTTGTCTGAGCCATTCAAAAACATCATGGAACAATGTTAAGGTTCTCATGGCTGACACAGACCGAAGTGACAAAAACTTCATCTTAGCTGAGAGAGCTGAGACTTTATTGTTTTGCTTGAAGCAAAGATATCCTGAACTTTCACAAACATCATTGGACACATGCAAGATTCAATACAACCGGGATGTAGGGAAAGCAATACTAGAAAGCTACTCAAGAGTTTTAGAAGGGTTTGCATTCAACATTGTAGCTTGGATTGAAGATGTTCTTCATGCAGATAAATCAATGAGGAACCAAAATGTATAGAAACCTCGACTGGGTTGTACACTAGCTTTCTGACCCTGGTGCTCTTTCCATTCAGCAATTTTTTGTATGCTATTAGATTTAGAAGTTAATAGATGTTTGTATTGAAAGCAGTTCACCTGCATCTGTATGACAATTAGTTTCTAGCTAGCAGTACTACAGAAAGAGTTTGACAT | 1613 | 0.4166 | MDNSSNFDENSDVGYQPSPSSVDQNDHSITETAGFSPFSGESFAYCRTNSEASNFSEPIDDNSFASEPSPSLWTPVKHGASQAALSRLGMKQHRHSLDAKSDDLDLLELELDMMRERFSKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKPEKKAMWKREMTCLLSVCDYIVEFAPTAQYLDDGTIVEMMTSRPRSDIYINLPALQKLDTMLMEILDSFLDTEFWYAEQGSVSGNSTRSRGGSFRRIVQRKDEKWWLPVPCVHPGGLSDKSKKHLSEKRDCANQIHKAAMAINSSVLAEMDIPETYMANLPKSGRASLGDTIYRYMYSADKFSPDHLLDCLKISSEHEALELADKVESSMFTWRRKACLSHSKTSWNNVKVLMADTDRSDKNFILAERAETLLFCLKQRYPELSQTSLDTCKIQYNRDVGKAILESYSRVLEGFAFNIVAWIEDVLHADKSMRNQNV | 479 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste6g02097 | 479 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Pste6g02097 | 479 | FunFam | Rop guanine nucleotide exchange factor 14 | 104 | 344 | - | - | |
| Pste6g02097 | 479 | Coils | Coil | 90 | 117 | - | - | |
| Pste6g02097 | 479 | PANTHER | ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 | 46 | 477 | IPR038937 | GO:0005085 | |
| Pste6g02097 | 479 | FunFam | Rop guanine nucleotide exchange factor 14 | 346 | 479 | - | - | |
| Pste6g02097 | 479 | FunFam | Rop guanine nucleotide exchange factor 2 | 313 | 437 | - | - | |
| Pste6g02097 | 479 | Gene3D | PRONE domain, subdomain 1 | 105 | 346 | - | - | |
| Pste6g02097 | 479 | Gene3D | PRONE domain, subdomain 1 | 347 | 479 | - | - | |
| Pste6g02097 | 479 | MobiDBLite | consensus disorder prediction | 56 | 70 | - | - | |
| Pste6g02097 | 479 | ProSiteProfiles | PRONE domain profile. | 101 | 479 | IPR005512 | GO:0005085 | |
| Pste6g02097 | 479 | MobiDBLite | consensus disorder prediction | 56 | 76 | - | - | |
| Pste6g02097 | 479 | Pfam | PRONE (Plant-specific Rop nucleotide exchanger) | 110 | 475 | IPR005512 | GO:0005085 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste6g02097 | Pste-Chr6 | 9888373 | 9890953 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste6g02097 | 6 | 9888373 | 9890953 | Pste6g02097 | 6 | 9888373 | 9890953 | ECH | |
| Pste5g01426 | 5 | 9098382 | 9101487 | Pste6g02097 | 6 | 9888373 | 9890953 | PCT |