Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02037 atgaggactgaattggatgctcttaaagctaatcgcacatggaccctcaccactctccctcccaacaaaactattattggttgccgctggattgttaaaaccaaattcaatacggacgactctgttgaacacaacaaagcttggcttattgcaaagggttatacccagatggaagctctttattttattgatactttctctccagtggccaaactcaccaatgtccgtgttctgctagctctggcctccattcacttgtggcatctcaaacaactggacgtgaataatgtctttcttcagggtgatctttatgaggaagtatacatgcaagttccccctaggttgtcctcctggccaggccaatcgctgaccattccttcttccatcgctattttaatggtttatgtggatgaccttattctctcaggcaataatctttctaacatgcatttcatcacttcactcctttattccacatttcacataaaggatttgggggatctcaaattcttcctcggacttgaagttgctcacactaaacatggcatttacttatgccaatgcaaatacgcacttgacattctttcggacattggcatgcttgcttgtcgccttgcttccacacctctaaactacagtttgcgacttcattcttcttctggggaccacttatctgacccttccccatacagacgtctcattggttgtcttatctaccttaccaccaccagaccagacatcaccttttcagtccaacatctcagtcaatttatgtctaaacctactgatgttcacttcaaagctgcctttcgaattctacgctacctcaaacaggcttctagccttggattctccatctacattggtcactctctggttgcctggcactccaagaaacaggatatggtgtccaaaagctcttttgaggctaaatatcgagttatggcctctacaacttgcgaagttcagtggctacactatctccttgagagtttcaaacttcgttttcctcgaccttctctcctgttttgtggtagtgatagcgcccttcaaattgatgctatggaatatgcagaatgcgaagctgttgttaaagattttcctccatttagagaggctatgaagaaaaggggaattgaagacatggaccttgtaatggttgatgcccggtatcttggttattacagtgaagctgatggttccagccgtagattaagtaaggcacttatatttttgagagctgaaagtgactgccctatggaaaatggctatgcacgcccagttgagggcatccatgtacttgtgaatatgcaaagcatggtggtgattgaatttgaagaccgtaaatttgttcctctgcctccggttgatcccttgaggaactatacacatggtgaaacaggaggtgaatctgatagaagtgatataaaacccttgcaaattattcagcttgaaggtccaagctttcgggtggatggttcttatgttgcatggcaaaagtggagctttcgtgttggattcacacccagagaaggtttggttatatactcagtagcatatgttgatggtaatcaagggagaaggccagtagctcatagactgagttttgtggagatggttgtgccgtacggagatccaaatgaaccacattacaggaagaatgcttttgattctagggaaaatggcttgggaaaaaatgcacattctctcaagaggggatgcgattgtttgggctacatcaaatactttgatgctcatttcacaaatttcactggtggagttgagacaatcgaaaattgtctatgtttgcacgaagaggatcatggaattctgtggaagcatcaagaccggagaacaggcttagcagaagtccgaagagaggcaattatcagctatttgtacaatgtgaccccatctttatgctctgatagttggttttacattaaacaggatggaaaaattgaagctgagattaagctaactggaattctaagcttaggaaccttgttacctggagagtttcgtaaatatggaaccatgattgcgccaggtctatatgctccagttcatcaacacttttttgtggctcgcatggatatggctgtggattctaaacctggtgatgctttgaatcaagtcgtggagattaatgtcagagtagaggaatcaggggacgttaatgttcacaataatgcattttatgctgaagagactctactcagatctgaattggaagccattcgtgattgcaatcctttgacttctcgacattggattataaggaacacgcgaataagcaatagaactggacagctgacaggctataagctagtacctggctcaaactgcttaccattagcaggttctgatgcagagtttttaagaagagctgctttcttgaggcataatctttgggtaacaccctattcacaccatgaaatgtttcctggaggagaatttcctaatcaaaatccaagtctcagccaaggactacctacatgggttaagcgaaaccgatctttggaagaaactgatatagttctttggtatgtctttggaatgacacacgtccctcgcttagaagattggccagttatgccggtagaacgcatcggttttatgctcatgcctcatggattcttcaactgttctcctgcagttgatgtcccacggcctaggccatgtgagttggatactaaagaaaatgaaatgaaggacactgaggcttcgaagcaaattgagggtgaattagtggcaaaactttag 2766 0.0 MRTELDALKANRTWTLTTLPPNKTIIGCRWIVKTKFNTDDSVEHNKAWLIAKGYTQMEALYFIDTFSPVAKLTNVRVLLALASIHLWHLKQLDVNNVFLQGDLYEEVYMQVPPRLSSWPGQSLTIPSSIAILMVYVDDLILSGNNLSNMHFITSLLYSTFHIKDLGDLKFFLGLEVAHTKHGIYLCQCKYALDILSDIGMLACRLASTPLNYSLRLHSSSGDHLSDPSPYRRLIGCLIYLTTTRPDITFSVQHLSQFMSKPTDVHFKAAFRILRYLKQASSLGFSIYIGHSLVAWHSKKQDMVSKSSFEAKYRVMASTTCEVQWLHYLLESFKLRFPRPSLLFCGSDSALQIDAMEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDARYLGYYSEADGSSRRLSKALIFLRAESDCPMENGYARPVEGIHVLVNMQSMVVIEFEDRKFVPLPPVDPLRNYTHGETGGESDRSDIKPLQIIQLEGPSFRVDGSYVAWQKWSFRVGFTPREGLVIYSVAYVDGNQGRRPVAHRLSFVEMVVPYGDPNEPHYRKNAFDSRENGLGKNAHSLKRGCDCLGYIKYFDAHFTNFTGGVETIENCLCLHEEDHGILWKHQDRRTGLAEVRREAIISYLYNVTPSLCSDSWFYIKQDGKIEAEIKLTGILSLGTLLPGEFRKYGTMIAPGLYAPVHQHFFVARMDMAVDSKPGDALNQVVEINVRVEESGDVNVHNNAFYAEETLLRSELEAIRDCNPLTSRHWIIRNTRISNRTGQLTGYKLVPGSNCLPLAGSDAEFLRRAAFLRHNLWVTPYSHHEMFPGGEFPNQNPSLSQGLPTWVKRNRSLEETDIVLWYVFGMTHVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPRPRPCELDTKENEMKDTEASKQIEGELVAKL 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02037 921 FunFam Amine oxidase 469 893 - -
Pste6g02037 921 MobiDBLite consensus disorder prediction 902 921 - -
Pste6g02037 921 SUPERFAMILY Amine oxidase N-terminal region 354 466 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pste6g02037 921 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 131 210 IPR013103 -
Pste6g02037 921 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 11 113 IPR013103 -
Pste6g02037 921 Pfam Copper amine oxidase, enzyme domain 479 886 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pste6g02037 921 CDD RNase_HI_RT_Ty1 280 352 - -
Pste6g02037 921 Gene3D - 355 457 - -
Pste6g02037 921 SUPERFAMILY Amine oxidase catalytic domain 473 891 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pste6g02037 921 PANTHER COPPER AMINE OXIDASE 344 903 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pste6g02037 921 Gene3D Copper amine oxidase, catalytic domain 466 891 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pste6g02037 921 SUPERFAMILY DNA/RNA polymerases 11 336 IPR043502 -
Pste6g02037 921 Pfam Copper amine oxidase, N3 domain 352 454 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pste6g02037 921 FunFam Amine oxidase 355 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02037 Pste-Chr6 9538326 9547403 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02037 1 409 Receptor kinase-like Gene Family AT4G23160 36.122 8.40e-89 303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02037 6 9538326 9547403 Pste6g02037 6 9538326 9547403 ECH
Pste6g02037 6 9538326 9547403 Pste2g00568 2 5400655 5407821 PCT