Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01981 ATGGAATTGGTTAAGAGCCAACAGCTTTTGTCCAAGATTGCAACCAATGACAAACATGGGGAGAATTCTCCATATTTTGATGGGTGGAAGGCATATGAGAGAAACCCATTCCACCCTACAAAAAATCCTCAAGGTGTTATCCAGATGGGTCTTGCAGAAAATCAGCTCTGCTTTGATCTGATTGAAGAGTGGATTAGGAATAATCCCAAGTCTTCCATTTGCACTCCTGAAGGAGTGCATCAGTTCAGAAATATTGCCAACTTTCAGGACTATCATGGGTTGCAAGAGTTCAGAAATGCAATGGCAAATTTTATGTCAAAAGTGAGAGGAGGTAGGGTCAGATTTGATCCAGATCGTATATTGATGAGTGGAGGGGCAACAGGGGCAAATGAACTAATCATGTTCTGCTTGGCTGATCCTGGAGATGCTTTTATGATTCCCACCCCATTTTATCCAGGATTTGTCCGTGACTTGTGTTGGAGAACCGGGGTGCAATTAATTCCTGTTCACTGTGATAGCTCCAACAACTTCAAGATAACAAGAGAGGCTCTTGAAGTAGCATACAAGAAAGCCAAAGAAGACAATATCAACGTAAAGGGGTTGATCATAACAAACCCTTCTAACCCTCTGGGCACAACATTGGAGAAGGACACGTTGAAGAGCCTAGTGAGCTTCATCAATGAGAAAAGTATTCACTTAGTGTGTGATGAAATCTATGCAGCCACCATGTTCAGCTCCCCTACCTTTGTAAGCGTTTCTGAATTGATTCAAGAAATGGAAGACTGCAACCGTGACCTCATTCATGTAATTTATAGTTTGTCTAAGGACATGGGGTTCCCTGGCTTCAGAATTGGCATAGTGTATTCATTCAACGATCAAGTGGTGAATTGCGGAAGGAAAATGTCAAGCTTCGGATTAGTCTCATCACAAACTCAACACATGTTGGCTTCAATGCTTTCGGATGAGAAATTTGTGACAAAGTTTCTTTCACAGAATCAAACAAGGTTAAAAAAAAGGCATGAGAAGTTCTCGAAGGGGCTTGAAGAGGTTAACATCACTCAACTCCCAAGCAATGCAGGACTTTTTTGCTGGATGAACTTGAAGAGTTTGTTGGAGGAAACAACGTTTGAAGCTGAGTTGAAGCTGTGGCATGTGATCATCCATGAAGTGAAGCTGAACGTGTCACCGGGTTCTTCTTTCAACTGTTCTGAGCCTGGTTGGTTTAGGGTTTGCTTCGCCAACATGGATGATGAAGCAGTGGATGTTGCACTCAGTAGAATTCGAGCATTCGTAGGTAAAGAAACTAAGAAACCTGTGGCACTCAAACGTTGGCAAGAGAATCTTAGGCTCAGTTTTTCTTCAAGGAGGTTGGATGAGACTGTTATATCTCCTCACTCATCTATTCCCAAGTCACCACTTGTTCCAGCTACTTGA 1434 0.424 MELVKSQQLLSKIATNDKHGENSPYFDGWKAYERNPFHPTKNPQGVIQMGLAENQLCFDLIEEWIRNNPKSSICTPEGVHQFRNIANFQDYHGLQEFRNAMANFMSKVRGGRVRFDPDRILMSGGATGANELIMFCLADPGDAFMIPTPFYPGFVRDLCWRTGVQLIPVHCDSSNNFKITREALEVAYKKAKEDNINVKGLIITNPSNPLGTTLEKDTLKSLVSFINEKSIHLVCDEIYAATMFSSPTFVSVSELIQEMEDCNRDLIHVIYSLSKDMGFPGFRIGIVYSFNDQVVNCGRKMSSFGLVSSQTQHMLASMLSDEKFVTKFLSQNQTRLKKRHEKFSKGLEEVNITQLPSNAGLFCWMNLKSLLEETTFEAELKLWHVIIHEVKLNVSPGSSFNCSEPGWFRVCFANMDDEAVDVALSRIRAFVGKETKKPVALKRWQENLRLSFSSRRLDETVISPHSSIPKSPLVPAT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01981 477 Gene3D - 69 321 IPR015421 GO:0003824
Pste6g01981 477 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 272 285 IPR004838 GO:0003824|GO:0009058|GO:0030170
Pste6g01981 477 Gene3D Aspartate Aminotransferase, domain 1 35 426 IPR015422 GO:0003824
Pste6g01981 477 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 49 75 - -
Pste6g01981 477 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 298 321 - -
Pste6g01981 477 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 119 139 - -
Pste6g01981 477 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 141 162 - -
Pste6g01981 477 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 231 254 - -
Pste6g01981 477 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 195 219 - -
Pste6g01981 477 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 82 98 - -
Pste6g01981 477 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 266 290 - -
Pste6g01981 477 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 8 429 - -
Pste6g01981 477 SUPERFAMILY PLP-dependent transferases 15 432 IPR015424 -
Pste6g01981 477 CDD AAT_like 87 429 - -
Pste6g01981 477 Pfam Aminotransferase class I and II 47 427 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01981 Pste-Chr6 9211931 9214752 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01981 6 9211931 9214752 Pste6g01981 6 9211931 9214752 ECH
Pste5g01293 5 8372138 8375541 Pste6g01981 6 9211931 9214752 PCT