Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01960 atggaaaccatggatagaggtttgtttgtacctggtggtctccaaccttatgtggacagtcccatgccaataggctacaatgttactatctctgcaccgcatatgcatgccacctgccttcagttgctggagaagaatttgcaacctggaatgcacgctctggatgttggctccggaacaggatacctgactgcatgctttgccttgatggttggaccccaaggtcatgctattggcgtggaacacattcctgagttggtttctttttcaattgagaatattaaaaaaagtgctgcagctcaaccattgaaagatggttccctttctgtgcatgttggggatggaagggaaggttggcctgagtttgctccttatgatgccattcacgttggagcagcggcaccagaaattccccaaccacttattgaccagttgaagccgggtggtagaatggttatccctgttggaaacttatttcaagatttacaggtcgtggataagaactctgatggttctatcaatatccggactaagacttctgttcgatatgtgcctctcactagcagggaagctcaactgcgaggttag 588 0.0 METMDRGLFVPGGLQPYVDSPMPIGYNVTISAPHMHATCLQLLEKNLQPGMHALDVGSGTGYLTACFALMVGPQGHAIGVEHIPELVSFSIENIKKSAAAQPLKDGSLSVHVGDGREGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNLFQDLQVVDKNSDGSINIRTKTSVRYVPLTSREAQLRG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01960 195 Gene3D Vaccinia Virus protein VP39 1 195 IPR029063 -
Pste6g01960 195 FunFam Protein-L-isoaspartate O-methyltransferase 1 195 - -
Pste6g01960 195 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 165 IPR029063 -
Pste6g01960 195 NCBIfam protein-L-isoaspartate O-methyltransferase 1 192 IPR000682 GO:0004719|GO:0036211
Pste6g01960 195 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 113 128 IPR000682 GO:0004719|GO:0036211
Pste6g01960 195 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 1 190 - -
Pste6g01960 195 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 1 193 IPR000682 GO:0004719|GO:0036211
Pste6g01960 195 CDD AdoMet_MTases 54 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01960 Pste-Chr6 9081174 9082909 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01960 6 9081174 9082909 Pste6g01960 6 9081174 9082909 ECH
Pste6g01960 6 9081174 9082909 Pste2g00517 2 4764437 4767358 PCT