Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01959 GTGTTCACTTCTGAGTGTTGAGTTTGTGTCTGCTTAAAAGATGTCGCAGTTGCTGGATAAAGCCAAGAACTTTGTGTCGGAGAAGATAAATGACATGGCCAAACCTGAGGCGAGTGTCACCGACGTGGACTTCAAGCGCGTGAGTAAAGATAATATAGAGTACTTGGCCAAGGTCTCTGTTCGAAATCCTTATTCAACTCCTATACCCATATGCGAGATCAACTACTCTTTCAAAAGTGCATCCAGGGAGATAGCAACAGGGAGAATTCCAGACCCAGGATGGTTGAAGGCAAAGGAGACGACAATGGTGGATGTGCCTGTGAAGGTTCCGTACAGCATATTGATGAGTTTAGCAAAGGATATTGGTGCTGACTGGGACATTGACTATCAATTGGATCTTGGCCTCATTATTGACATTCCTGCCATTGGCAACATCACCATTCCTCTCTCTTACAAGGGAGAGCTCAAGCTACCAACCCTCTCTGCCATGTTCGCTTAATTAGCTACCTACCTAGTTCCATCACAACTCTTACAAGTTACAACAAATTATAAATAACTGCACACTCCATGCTGCATGTCTTTTACTTTATACTCCTATCTTTTGTTCTTGTTCTTCTATACATGCCTTTGTAACAGTCATAGCTGTCAACCTGTTTTGTGCTT 663 0.4299 MSQLLDKAKNFVSEKINDMAKPEASVTDVDFKRVSKDNIEYLAKVSVRNPYSTPIPICEINYSFKSASREIATGRIPDPGWLKAKETTMVDVPVKVPYSILMSLAKDIGADWDIDYQLDLGLIIDIPAIGNITIPLSYKGELKLPTLSAMFA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01959 152 SMART why 24 141 IPR013990 GO:0009269
Pste6g01959 152 Pfam Late embryogenesis abundant protein 44 139 IPR004864 -
Pste6g01959 152 Gene3D - 17 151 - -
Pste6g01959 152 PANTHER - 3 146 IPR045043 -
Pste6g01959 152 FunFam Desiccation protectant protein Lea14-like 17 151 - -
Pste6g01959 152 SUPERFAMILY LEA14-like 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01959 Pste-Chr6 9079260 9080493 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01959 6 9079260 9080493 Pste6g01959 6 9079260 9080493 ECH
Pste5g01281 5 8233881 8236596 Pste6g01959 6 9079260 9080493 PCT