Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01854 atggacattggtagctatcctacaccagcagtgaaaaatattgcgtctcactatgatgtgccagaaggagtggatattcggggaagatatgatgcagggtttgcaaaaatcctgacaaaagatgctttgaaatttgttgctgacctgcaacgtaagttcaggaaccatatcaagtatgcattagagtgcagaagagaggcaaagaggaggtacaatgaaggaggtattccagggtttgatcctgccactaggtatataagagaacaggaatgggtgtgtgcacctgttccaccagctgttgctgataggaaagtggagatcactggacctgtggaaagaaagatgatcatcaatgctctcaactctggagctaaagtctttatggctgattttgaagatgcactgtccccaagctgggaaaatcttataagaggccaagtgaacttgaaggatgctgtggatgggaccataagcttccatgacaaagtaagaaacagggtttacaagctcaatgatcagacagcaaagctttttgttcgaccaagaggttggcacctaccggaggcacatattcttattgatggtgagcctgcaactggttgccttgttgattttggcctctacttctaccacaatcactcagcgttccggcgcactcaaggtgctggttttggccccttcttttatcttcccaaaatggagcattcaagggaagctaagatatggaacagcgtgtttgagaaggctgagaaggtagcaggaattgagagaggaagcataagggcaacggttctgatagaaacacttcctgcggtgtttcaaatggatgaaattctgtatgagctgaaggagcactcggtgggtctgaactgtggacgttgggattacatattcagttatgttaagaccttccaggctcacccagatcgcctcctacctgacagggtcctggttggcatgactcaacacttcatgaagagttactctgatctcctcatcaggacgtgccacaggagaggtgtgcatgctatgggaggaatggcagcgcaaattccaatcaaagatgacccagtggcaaatgaggcagcagtggaacttgtaaggaaggacaagcttagagaagcgaaggcagggcacgatgggacttgggctgcacaccctggtctcattccaacttgtttagaggttttcaacaacaacatgggcaatgctccgaaccagataaagacaatgaaacgggaagatgctgcaaagataactgaacaagacctcttgcaggtaccgagaggagggcgcagcatggaaggtctgagactaaacacaagggtagggattcagtacgtggcagcatggctcagtggaaccggttcggtgcctctttacaacctgatggaagatgctgccactgctgagattagcagggtgcagaactggcagtggctcaagtatggggtggaactcaatggggacgggcttggagttaaagtgaacagacaactttttgctagggtggttgaagaagagatggctaggattgaaaaggaagtcgggactgagaggttcaagaggggaatgtacaaggaagctcgcaacatcttcactcgccaatgcacctccccaacacttgatgattttctcactctagatgcctataattacattgtccttcatcaccccacggaaacatcaaagctttga 1698 0.0 MDIGSYPTPAVKNIASHYDVPEGVDIRGRYDAGFAKILTKDALKFVADLQRKFRNHIKYALECRREAKRRYNEGGIPGFDPATRYIREQEWVCAPVPPAVADRKVEITGPVERKMIINALNSGAKVFMADFEDALSPSWENLIRGQVNLKDAVDGTISFHDKVRNRVYKLNDQTAKLFVRPRGWHLPEAHILIDGEPATGCLVDFGLYFYHNHSAFRRTQGAGFGPFFYLPKMEHSREAKIWNSVFEKAEKVAGIERGSIRATVLIETLPAVFQMDEILYELKEHSVGLNCGRWDYIFSYVKTFQAHPDRLLPDRVLVGMTQHFMKSYSDLLIRTCHRRGVHAMGGMAAQIPIKDDPVANEAAVELVRKDKLREAKAGHDGTWAAHPGLIPTCLEVFNNNMGNAPNQIKTMKREDAAKITEQDLLQVPRGGRSMEGLRLNTRVGIQYVAAWLSGTGSVPLYNLMEDAATAEISRVQNWQWLKYGVELNGDGLGVKVNRQLFARVVEEEMARIEKEVGTERFKRGMYKEARNIFTRQCTSPTLDDFLTLDAYNYIVLHHPTETSKL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01854 565 FunFam Malate synthase 431 555 - -
Pste6g01854 565 SUPERFAMILY Malate synthase G 20 556 IPR011076 GO:0003824
Pste6g01854 565 Gene3D Malate synthase, domain 3 20 430 IPR046363 -
Pste6g01854 565 NCBIfam malate synthase A 37 554 IPR006252 GO:0004474|GO:0006097
Pste6g01854 565 CDD malate_synt_A 37 555 IPR006252 GO:0004474|GO:0006097
Pste6g01854 565 ProSitePatterns Malate synthase signature. 283 298 IPR019830 GO:0004474|GO:0006097
Pste6g01854 565 Pfam Malate synthase 25 555 IPR001465 GO:0004474|GO:0006097
Pste6g01854 565 Gene3D Malate synthase, domain III 432 555 IPR044856 -
Pste6g01854 565 PIRSF Malate_synth 15 556 IPR006252 GO:0004474|GO:0006097
Pste6g01854 565 PANTHER MALATE SYNTHASE 18 561 IPR006252 GO:0004474|GO:0006097
Pste6g01854 565 FunFam Malate synthase 20 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01854 Pste-Chr6 8541504 8546627 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01854 6 8541504 8546627 Pste6g01854 6 8541504 8546627 ECH