Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01847 atggcgctgttcctgctttacgaatccgcttctggctatgccctgttcgaggctcacggcttcgacgaaatcggtcagaacaccgaagcagttcgcaactccgtttccgacctcaacaggttcggcaaagtcgttcagcttcgttccttcaatccttttacttccgctctcgatgccctcaaacagtgcaacgccgtctccgaaggtctactaactgatgagctgagggctgttctggagactaacttgcctagggtgaaggaaggtaagaaggctaagttcagtttaggtgtgtctgatcctaagattggttcacaaatatctgaactgactaagattccttgccaaagtaatgagtttgtgagtgagcttcttcgtggtgttcgactccattttgatacttttgttggtgatctcaagtctggagatttagaaaaggcccaactaggtttggggcatagttacagcagagcaaaggtgaagtttaatgttaatcgagttgacaatatggttattcaagctatcttccttcttgatacacttgataaggatataaattctttttccatgagagtcagagagtggtattcatggcattttcctgagctcgtcaaaatagtaaatgataattatctgtatgccaaagttgcaaaatttattgaggataaggcaaagttagctgaagacaagattccagcattaactgacatagttggagatgaagataaagcgaaggagattgtggaagctgccaaagcttctatgggacaggatttgtccccagtggacttgatcaatgtccagcaatttgctcagagggtaatggacctatctgagtacaggaaaaacttgtatgattaccttgttgctaaaatgaatgatattgccccaaatttggcctctttaattggtgaagttgttggcgctcgattgatttcgcatgctggtagccttacaaatttagccaagtgtccttcttcaactcttcaaattcttggtgcagagaaggctttgttcagggcattaaaaacaagaggaaacactcccaaatatggtttgatattccactcttctttcattggtcgggcgtctgccaaaaataagggcagaatggctcgttatcttgcaaacaaatgctcaattgcatcacggattgactgcttttctgaaagaggtactactgtgtttggggagaaactccgtgagcaagttgaggaacgacttgacttttatgacaaaggagttgcccctcgcaagaacatagatgtcatgcagtctgctattgaaagtgctgaaaataaagttgcagatgcggagatggaaatagaaacacctgccgaagtttcaggcaagaaatccaaaaagaagaaacaaaaatctgctgctgctgaaggtgatgacatggctgtagacaagcctacagaagttacaaatggtgatgctgtggaggatcataaatcagagaaaaagaagaagaagaaagaaaagaggaaattggaagaggagatggagcaccatgatcaagctgaagaggatggtgccaatggtgtcgcaagtgaacaagacggaacagtcaaaaagaagaagaataaaaaggaaaaaactggagaagtattggaagcggccgcggagactaagaagaagaaaaagaaatcaaaaaaagataccgagtaa 1674 0.0 MALFLLYESASGYALFEAHGFDEIGQNTEAVRNSVSDLNRFGKVVQLRSFNPFTSALDALKQCNAVSEGLLTDELRAVLETNLPRVKEGKKAKFSLGVSDPKIGSQISELTKIPCQSNEFVSELLRGVRLHFDTFVGDLKSGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKFIEDKAKLAEDKIPALTDIVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMDLSEYRKNLYDYLVAKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRMARYLANKCSIASRIDCFSERGTTVFGEKLREQVEERLDFYDKGVAPRKNIDVMQSAIESAENKVADAEMEIETPAEVSGKKSKKKKQKSAAAEGDDMAVDKPTEVTNGDAVEDHKSEKKKKKKEKRKLEEEMEHHDQAEEDGANGVASEQDGTVKKKKNKKEKTGEVLEAAAETKKKKKKSKKDTE 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01847 557 SMART NOSIC_2 170 222 IPR012976 -
Pste6g01847 557 MobiDBLite consensus disorder prediction 522 557 - -
Pste6g01847 557 MobiDBLite consensus disorder prediction 432 557 - -
Pste6g01847 557 Gene3D Nop domain 299 422 IPR042239 -
Pste6g01847 557 FunFam Nucleolar protein 56 299 411 - -
Pste6g01847 557 Coils Coil 482 512 - -
Pste6g01847 557 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Pste6g01847 557 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
Pste6g01847 557 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Pste6g01847 557 MobiDBLite consensus disorder prediction 434 451 - -
Pste6g01847 557 FunFam Nucleolar protein 56 140 298 - -
Pste6g01847 557 SUPERFAMILY Nop domain 163 412 IPR036070 -
Pste6g01847 557 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 3 550 IPR045056 GO:0030515|GO:0031428|GO:0032040
Pste6g01847 557 Coils Coil 539 557 - -
Pste6g01847 557 Coils Coil 421 441 - -
Pste6g01847 557 Gene3D - 140 298 - -
Pste6g01847 557 MobiDBLite consensus disorder prediction 459 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01847 Pste-Chr6 8481802 8489216 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01847 6 8481802 8489216 Pste6g01847 6 8481802 8489216 ECH