Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01747 atggccaggcctaatcaggaggcagtcgagaccttcgttagcattactggcttgccagaagccatagcgctgcagaaactcgaggagcatggtggtaatctcaatgaagcagtcaatgcacattttagtgaaggagacagaaatctaatgaccagttctactgtgttacctcaagatgatttcatggatatagataatgatcaacgtgatgcagaaattcccagacttccatcacttcaagcttcggcagcaaatttcaatccattttctcttcttgatccaacaattgggagaggtatattgggtagtcgttttgattcaacagtgcaaacaccatttgttacacatccaagagagatacgggagattcctatagaggttaaggatgatagtctttcctctcctctacctggtcatcttccatctgttgaggatgttactggaactgccaatgctcatggtccagaaatccatggtactgtcataatcgatgatgatgatgacgacaatacttcaccagcccaggttgcagatcaaaacgagcaacaacataagatcttggctgatacttcacttaatagaagtgcacctagtgctcctgaatctgataatttactagattatggcaatgacatagaagaagaaatgcttcgtgcagccattgaggcttctaagagggaggctgaggaaaattacagaaatcacaaacctggcagacaaactgacttaagtgaatcaggatcacagtcaaggcaatcttatctggaggatcccgagcttgcccatgcggtttcattgtccctgaagacagctgaacaagaaaaggcaaagcgtgtacaaaaaggagattctgaattaccaacagcagggccatctaaatcatcagaggctggaccaggggaagtggcatcaaatggaagattgcaggcaggaagcttgtcctttcacgatgaagctgaagatgtagaggagcagccgctcgttaggaacagatctagacatatgtctttgggatccacaggattgggcaaagatgttgaattttctgaggctagcacattaccaactacagcaacacagaatagtagtaatcctcatcacaatggaaattccttcccctctgatgagtggggtggcatttcttcagaggagcatgatgaagcagtaatgctagaagctgcaatgtttggtggaatcccagaagggagtggatatcactatggttatgcaccacatgagtatatgcaaaataggggtttcaatcctcggccccaatatcgacctccttcaccatcactggcagctcaacgtttgatcagggagcagcaggatgatgaatatcttgcatcattacaagcagacagagaaaaagaattgaaggctatggaggaagctgaagctgctcgtgaagaggaaaggcggagagcagaagaatctcgcaggaaattacaggaagagcaggaattggaaacactgttagcagccaaagaagtttcactaccagcggaaccatcctcagacaatgataatgctgtgaacttgatggtaaaaatgccagatggaaatcgtcgtggacgtcgattcctaagatctgataggctacagtctctgttggacttcatagacattggcagggtggtgaaaccgggcagctacagactggtgagaccatatcctaggcgtgcttttagtgatggagaaagtgctgcgacactggatgaactaggcctaaccaacaagcaagaagctttgtttttggagttaatatga 1770 0.0 MARPNQEAVETFVSITGLPEAIALQKLEEHGGNLNEAVNAHFSEGDRNLMTSSTVLPQDDFMDIDNDQRDAEIPRLPSLQASAANFNPFSLLDPTIGRGILGSRFDSTVQTPFVTHPREIREIPIEVKDDSLSSPLPGHLPSVEDVTGTANAHGPEIHGTVIIDDDDDDNTSPAQVADQNEQQHKILADTSLNRSAPSAPESDNLLDYGNDIEEEMLRAAIEASKREAEENYRNHKPGRQTDLSESGSQSRQSYLEDPELAHAVSLSLKTAEQEKAKRVQKGDSELPTAGPSKSSEAGPGEVASNGRLQAGSLSFHDEAEDVEEQPLVRNRSRHMSLGSTGLGKDVEFSEASTLPTTATQNSSNPHHNGNSFPSDEWGGISSEEHDEAVMLEAAMFGGIPEGSGYHYGYAPHEYMQNRGFNPRPQYRPPSPSLAAQRLIREQQDDEYLASLQADREKELKAMEEAEAAREEERRRAEESRRKLQEEQELETLLAAKEVSLPAEPSSDNDNAVNLMVKMPDGNRRGRRFLRSDRLQSLLDFIDIGRVVKPGSYRLVRPYPRRAFSDGESAATLDELGLTNKQEALFLELI 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01747 589 SMART ubx_3 504 588 IPR001012 GO:0005515
Pste6g01747 589 Gene3D - 1 45 - -
Pste6g01747 589 MobiDBLite consensus disorder prediction 226 240 - -
Pste6g01747 589 MobiDBLite consensus disorder prediction 148 180 - -
Pste6g01747 589 MobiDBLite consensus disorder prediction 318 380 - -
Pste6g01747 589 MobiDBLite consensus disorder prediction 457 486 - -
Pste6g01747 589 Pfam UBX domain 508 587 IPR001012 GO:0005515
Pste6g01747 589 MobiDBLite consensus disorder prediction 226 255 - -
Pste6g01747 589 Pfam UBA-like domain 6 46 - -
Pste6g01747 589 SUPERFAMILY Ubiquitin-like 470 585 IPR029071 -
Pste6g01747 589 CDD UBX 513 587 - -
Pste6g01747 589 SUPERFAMILY UBA-like 2 44 IPR009060 GO:0005515
Pste6g01747 589 MobiDBLite consensus disorder prediction 241 255 - -
Pste6g01747 589 ProSiteProfiles UBX domain profile. 507 585 IPR001012 GO:0005515
Pste6g01747 589 MobiDBLite consensus disorder prediction 271 306 - -
Pste6g01747 589 CDD UBA_Ubx1_like 6 42 - -
Pste6g01747 589 MobiDBLite consensus disorder prediction 350 377 - -
Pste6g01747 589 Gene3D - 207 282 - -
Pste6g01747 589 SMART uim 212 231 IPR003903 -
Pste6g01747 589 SMART uim 255 274 IPR003903 -
Pste6g01747 589 Gene3D - 508 588 - -
Pste6g01747 589 Coils Coil 448 495 - -
Pste6g01747 589 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 213 231 IPR003903 -
Pste6g01747 589 PANTHER FAS-ASSOCIATED PROTEIN 11 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01747 Pste-Chr6 7875803 7880209 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01747 6 7875803 7880209 Pste6g01747 6 7875803 7880209 ECH