Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01735 CACAACACAAGTGCATTTTTTTTTTTTAGCTATAGATATCAGAAGGCATTGCCGTGTAAGCAAGCAATAAGCAATCGCAATTCTAAATCCGATGACCAAAGTAGAAAAGCACAATCATAAACCTTAACATTCACAGCCTCCATAGTTTCTCTGTTTTCCTTTCCAACTTCACCAACCACTGCACTGCCTATGTAATCATGGACTTCATTTCTCTGTTCTTTCCTTTTTTCCTGGTGAAGCTTGTCCTCAAGTTAAAGTATCCCAATTCTTCCATTATTATGCGTCTCTTCCAAGCAACCTTCCACTACCATCCCAACTCCTAAATCCTACTTTACCACTCTCTCAATTCATCTATCAAGCCATCAATAACAATATCAATATCAATATATACACACATTATATCTCACCAAAATCTCATACTCTCGTTATTTGTTCCCAAATCACACATTTCCCTTACCCTATTACCAAACCCCTAAATACAAATCATGAAACTTTCGCCCTTTCATCTTCCCCGACAACTCAAAGCCCACAAATTAAACACTGGGCGTTCTAATTAGCCACAAAAGTTTCAATTTTGACTTCTGGCCCGGCCATGGCACCTCAAATGCAACCCTTTGGCGCATTCCTCCGTGCCCCGCCGCAGGCTGACGCCGCCGCCGATCACCGGAACCAGCCGCCTCCGCCGAAGAAAACAATTAAGAAGACTCTTATAGTAGAAGACTCCTCCTTGGACAACCCCGATCTGGGGCCGTTTCTTCTTAAGATGGCCCGAGAAACAATCGCTTCGGGCGAAAGCCCAGTAAAGGCCCTGGACTTTGCCATTCGAGCCTCGAAATCCTTCGAGCGGTGTGCGGGCCTGGGCCTGGAACTGGCCACGTGTTTGCATGTGGTTGCTGCGATCTACAGCAGTTTGGGGCGGTTGGATGAGGCGGTTGAGGCGTTGGAGCGGTCGATTATGTTGTTGGAAGTGGAAAACGGGTCGGGTCATGCGATGGCACAGTTTTCGGGGTACATGCAACTTGGGGACACTTACTCGATGATAGGGCAGTTGGATAGGGCGATATCGTGTTACGAGTCGGGTTTGAAGATCCAAATGGATGTGTTGGGTGAGTCCGACCCGAAAGTTGCTGAAACTTGTAGGTACCTAGCTGAAGCTCATGTTCAAGCCATGCAATTTGACCAGGCTGAGAACTTTTGCAAGAAGACCCTTGAAATTCACAGGGAGCATTGTTCTCCTGCTTCCCTTACTGAAGCAGCTGACAGGCGTCTAATGGCCCTTATATGTGAGGCAAAGGGAGATTATGAGCCAGCACTTGAACACCTTGTCCTGGCTAGCATGTCAATGATTGCTAATGCGCAAGATAACGAGGTTGCAGCTATTGATGTTAGTATTGGAGATATTTACTTGTCACTCTGTCGTTTTGATGAGGCTGTTTTTGCTTATCAGAAAGCACTAACAGTGTTCAAATCCACCAAAGGGGAGAGCCACAGTTGTGTGGCATTAGTGTACATTCGCCTTGCTGACCTTTACTACAGGACAGGAAAATTAAGAGAATCAAAATCGTATTGTGGAAATGCCTTAAGAATATACAGTAAGCCTGTGGCTGGAATAACAGCTGGGGAGATTGCGAGTGGTTTGACTGAAATCTCTGCTATCTATGAAGCTCTAAATGAGCCTGAGGAGGCCCTGAAGCTGTTGCAGAAGGCAGTGAAATTGTTGGAGGATATCCCTGGACAATATAGGACAGTAGCAGGAATAGAAGCTCAAATGGGAGTGATGTTCTACATGGTTGGGAAGTATGTGGATGCTTGGAAGTCTTTTGAGAATGCTATCACCAAGCTGAGAGCCAGTGGGGAGAAGAAATCTGCCTTTTTTGGAGTTGTATTGAATCAGATGGGGCTAGCATGTGTGCAACTGTATAAAATAGGAGACGCTGCCAAACATTTTGAAGAAGCAAGAGAGATATTGGAGAGAGTGTGTGGAACATATCATTCTGATACTCTTGGGGTGTATAGCAATCTTGCAGCAACTTATGATGCCTTGGGGAGAGTTGAAGATGCCATTGAGATATTGGAATACATACTAAAGATGAGAGAAGAAAAACTTGGAACGGCTAATCCAGATGTTGATGAGGAAAAGAAGCGATTATTTGAGCTTTTGAAAGAAGCAGGAAGAGTTCGGAATAGAAAGGGGAAAAAATCACTTGAAAACCTTATAGATTCCAATGCCTTCAAGATGAAGAAGGAAGGGAAAAAGAGATGGACTGCTTTTGGTTTGAGAACTTAAAAAGAAGTCTTGTTCTTTTCTTTTTTAAAGTAAAAAACAAAAGTCCCTCCGTTACGATAGTATCTTTTAAGAGTAATGGTAGTTTCTCATAGTTAATGGTCACTAAATAATTTTATTTTGACTAACAAACAGAGAAAAGGAAATGGGTGGTGGTGACCAATATTCCGAGGATTAAGTCAATGAAAGTCATGTAAAAGTGATATTATATAT 2497 0.4325 MAPQMQPFGAFLRAPPQADAAADHRNQPPPPKKTIKKTLIVEDSSLDNPDLGPFLLKMARETIASGESPVKALDFAIRASKSFERCAGLGLELATCLHVVAAIYSSLGRLDEAVEALERSIMLLEVENGSGHAMAQFSGYMQLGDTYSMIGQLDRAISCYESGLKIQMDVLGESDPKVAETCRYLAEAHVQAMQFDQAENFCKKTLEIHREHCSPASLTEAADRRLMALICEAKGDYEPALEHLVLASMSMIANAQDNEVAAIDVSIGDIYLSLCRFDEAVFAYQKALTVFKSTKGESHSCVALVYIRLADLYYRTGKLRESKSYCGNALRIYSKPVAGITAGEIASGLTEISAIYEALNEPEEALKLLQKAVKLLEDIPGQYRTVAGIEAQMGVMFYMVGKYVDAWKSFENAITKLRASGEKKSAFFGVVLNQMGLACVQLYKIGDAAKHFEEAREILERVCGTYHSDTLGVYSNLAATYDALGRVEDAIEILEYILKMREEKLGTANPDVDEEKKRLFELLKEAGRVRNRKGKKSLENLIDSNAFKMKKEGKKRWTAFGLRT 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01735 564 Coils Coil 107 127 - -
Pste6g01735 564 Gene3D Tetratricopeptide repeat domain 91 247 IPR011990 GO:0005515
Pste6g01735 564 ProSiteProfiles TPR repeat profile. 261 294 IPR019734 GO:0005515
Pste6g01735 564 SUPERFAMILY TPR-like 76 508 IPR011990 GO:0005515
Pste6g01735 564 Pfam MalT-like TPR region 98 247 IPR041617 -
Pste6g01735 564 Gene3D Tetratricopeptide repeat domain 458 544 IPR011990 GO:0005515
Pste6g01735 564 ProSiteProfiles TPR repeat profile. 346 379 IPR019734 GO:0005515
Pste6g01735 564 ProSiteProfiles TPR repeat profile. 137 170 IPR019734 GO:0005515
Pste6g01735 564 SMART tpr_5 346 379 IPR019734 GO:0005515
Pste6g01735 564 SMART tpr_5 471 504 IPR019734 GO:0005515
Pste6g01735 564 SMART tpr_5 303 336 IPR019734 GO:0005515
Pste6g01735 564 SMART tpr_5 261 294 IPR019734 GO:0005515
Pste6g01735 564 SMART tpr_5 179 212 IPR019734 GO:0005515
Pste6g01735 564 SMART tpr_5 94 127 IPR019734 GO:0005515
Pste6g01735 564 SMART tpr_5 387 420 IPR019734 GO:0005515
Pste6g01735 564 SMART tpr_5 137 170 IPR019734 GO:0005515
Pste6g01735 564 SMART tpr_5 429 462 IPR019734 GO:0005515
Pste6g01735 564 Gene3D Tetratricopeptide repeat domain 248 427 IPR011990 GO:0005515
Pste6g01735 564 Pfam Tetratricopeptide repeat 260 333 - -
Pste6g01735 564 Pfam Tetratricopeptide repeat 431 503 - -
Pste6g01735 564 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 32 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01735 Pste-Chr6 7806794 7812240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01735 100 306 Glycosyltransferase AT3G04240 24.771 1.79e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01735 6 7806794 7812240 Pste6g01735 6 7806794 7812240 ECH