Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01716 ATGGAAAAGAATGAGCAGAAGATGAGCATGGAAGCAGAGTTTGAAGACTTGCTGCCAGTGATGGCAGAGAAGCTTGATGTGGAGTCCTTTGTGTCAGAATTGTGTGGGGGTTTCAAGCTTCTATCAGACCCAGAAACAGGTATGATCACAAGTGAGAGTCTAAGGACAAACTCAGCTCTTCTGGGCATGGAAGGCATGAGCAAGGAGGATGCTGAGGCTATGGTGAGACAAGGTGATCTTGATGGAGATGGAAAGCTTAATGAAACTGAATTTTGCATCCTCATGGTCAGGCTTAGCCCTGGCATGATGCAAGATGCTGAGACCTGGCTTGAGAAGGCACTTCATCAAGACCTTAGCAACTCCTCAGCTTAG 372 0.4704 MEKNEQKMSMEAEFEDLLPVMAEKLDVESFVSELCGGFKLLSDPETGMITSESLRTNSALLGMEGMSKEDAEAMVRQGDLDGDGKLNETEFCILMVRLSPGMMQDAETWLEKALHQDLSNSSA 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01716 123 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Pste6g01716 123 SUPERFAMILY EF-hand 28 106 IPR011992 -
Pste6g01716 123 ProSitePatterns EF-hand calcium-binding domain. 79 91 IPR018247 -
Pste6g01716 123 PANTHER CALCIUM-BINDING PROTEIN KIC 8 120 IPR044205 GO:0005509
Pste6g01716 123 Gene3D - 11 123 - -
Pste6g01716 123 Pfam EF-hand domain pair 45 97 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01716 Pste-Chr6 7652443 7652814 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01716 10 122 EF-hand Containing Proteins AT2G46600 73.451 1.76e-59 177
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01716 6 7652443 7652814 Pste6g01716 6 7652443 7652814 ECH