Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01705 atgggtgttggtgatatttacagtacccaagtacagatttatgcagaatgcgaggacggcagcaaacatatcatactacgactacatcgtgattggcggcggcacggcgggtgtcctttagccgccacactgtcccaaaattacagtgtgttgctccttgaacgcggcggctctccctacggcaaccccaacatcagcaacttagctgctttcggtgctgccctctccgacacctctccttcctcccccgctcagcgtttcatctcccaagacggtgtcatcaactcaagagcccgcgttcttggcggtggaagttgcctcaacgctggcttttacactcgcgccagccctcagtatgtaagggaagcggggtgggatggaagggcagtgaatgagtcgtatgagtgggtggagaagctagtggcgtttgagcctccaatgaagcagtggcagtcggctgtgcgagatggactcctcgagataggtgtgctgcccaataatggcttcacttatgatcatattgaagggactaaggttgggggcaccatctttgaccacaacggcttcaggcacaccgccgctgatcttttggaatatgccaaccccactcgtattactgtgctcttggatgccactgtccataggatcttgtttagagtcaaagatggatccaagccaatggcccatggagttgtcttcagagattccttgggtcgtagacacaaggcctacctcaaccaccatccaaggaacgagattattgtttcggcaggggcgcttggaagcccacaacttttaatgctgagtggaattgggccgtccaaccaccttaaggcccataacatcagattaacgttggatcagccattggtgggacaggggatgtcagataacccgatgaacgctatatttgtcccatctcctcgggacgtggaggtatctctaattgaggtggtgggcatcaccagtttcggtagctacatcgaagctgccagtggtgaaaactttgccgggggttccccaagagactacggaatgttctctcccaagattgggcaactgtccacagtgcccccgaagcaaaggagcccagaagcccttgctaaggcaacaaaagatatggagagtctggacgaagcagccttcagaggcggattcatcttggagaaaatcatgggtccaatctcaacggggcatttggaactcccaagccgcgatccaaaccataatccattagtcaccttcaactacttcaaggagacgcgtgacttagagcgatgcgtgcagggtctcaccacagtcgaaaagataatagaatccaaggcattctctccattcagataccccaacatgccaatctccctcttactaaacatgactgcaagtgcccctgttaacttgctacctaaacacaccaattcctcactttctctccaacagttctgcagagacactgtcatgaccatttggcactaccacggaggctgccaagttcggaaagttgttgataatgattacaaggttcttggcgtagacgcactgcgtgttattgatggttccacctttaatgactctcctggaactaatcctcaagccactgttatgatgctcggcaggtatatgggagtcaaaatattgagccagagacttggtgctgcgccttctgcttaa 1671 0.0 MGVGDIYSTQVQIYAECEDGSKHIILRLHRDWRRHGGCPLAATLSQNYSVLLLERGGSPYGNPNISNLAAFGAALSDTSPSSPAQRFISQDGVINSRARVLGGGSCLNAGFYTRASPQYVREAGWDGRAVNESYEWVEKLVAFEPPMKQWQSAVRDGLLEIGVLPNNGFTYDHIEGTKVGGTIFDHNGFRHTAADLLEYANPTRITVLLDATVHRILFRVKDGSKPMAHGVVFRDSLGRRHKAYLNHHPRNEIIVSAGALGSPQLLMLSGIGPSNHLKAHNIRLTLDQPLVGQGMSDNPMNAIFVPSPRDVEVSLIEVVGITSFGSYIEAASGENFAGGSPRDYGMFSPKIGQLSTVPPKQRSPEALAKATKDMESLDEAAFRGGFILEKIMGPISTGHLELPSRDPNHNPLVTFNYFKETRDLERCVQGLTTVEKIIESKAFSPFRYPNMPISLLLNMTASAPVNLLPKHTNSSLSLQQFCRDTVMTIWHYHGGCQVRKVVDNDYKVLGVDALRVIDGSTFNDSPGTNPQATVMMLGRYMGVKILSQRLGAAPSA 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01705 556 SUPERFAMILY FAD-linked reductases, C-terminal domain 295 495 - -
Pste6g01705 556 PIRSF Alcohol_oxidase 35 554 IPR012132 GO:0050660
Pste6g01705 556 ProSitePatterns GMC oxidoreductases signature 2. 258 272 IPR000172 GO:0016614|GO:0050660
Pste6g01705 556 Gene3D - 36 538 IPR036188 -
Pste6g01705 556 Gene3D - 143 488 - -
Pste6g01705 556 Pfam GMC oxidoreductase 38 299 IPR000172 GO:0016614|GO:0050660
Pste6g01705 556 PANTHER OSJNBA0019K04.7 PROTEIN 36 550 - -
Pste6g01705 556 SUPERFAMILY FAD/NAD(P)-binding domain 36 548 IPR036188 -
Pste6g01705 556 Pfam GMC oxidoreductase 394 539 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01705 Pste-Chr6 7597871 7600139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01705 37 549 Miscellaneous Gene Families AT5G51950 59.615 0.0 615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01705 6 7597871 7600139 Pste6g01705 6 7597871 7600139 ECH