Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01604 TAACGTTTGAGGTGTCTAAGCGATGAAACACAAGAATCATTCTATGGTTGCCACGTGTACGGTACCACACTACAAATGTTGCACTCTCCTGTGCAATCTTTAGAAGCATTCAATAATATAATGTTAATGCTTTGTCCCTCTGATTAAGCTTGCAACTTGCTTCATTCAACTTCCAGAAACTTCAACCAGCTCTCCCTCCCAGAGAGTTTGCTTTGTCTGGTTGAGTAGTGACAAAAATGGCAGCACTGACCGCTTCAAGTAACTTGGTCTCTGGAAGTTCTAATGTCCACCACAGGCTCAGTGCTTCTTCATATGAGTCTAAAGCAGTGACAATGGGACTCAGATCTCTAAAGCAGAGCAGTATTCATAGTGGACTGAGAATTTTGAACCCAGTGGACGAGCTACTTAACAGAACCTCAATTAAAAGCTATGCAGTGGAAGCAAAGAGGAAGGGACTTCAAAGCAAGAATGTCAAGCCTAAAGGTACAATCACGTGTGGTATGACTTTCATATTTATAGGAATGGAGGTGGCTCCATGGAGCAAAACAGGCGGGTTAGGAGATGTTCTTGGAGGTCTACCACCGGCATTGGCAGCTTTTGGGCATCGAGTTATGACTATTTCGCCGCGTTATGACCAGTACAAAGATGCATGGGATACCAGTGTTGTAATTGAGGTGAAAGTAGGAAGTAGAATAGAAAAGGTTCGCTTCTTCCATTGCTATAAGAGGGGAGTTGATCGTGTCTTTGTGGATCACCCTTGGTTTCTTGCAAAGGTCTGGGGGAAAACTGGAACCAAACTTTATGGACCAACTACAGGAGATGATTACGAAGACAACCAACTACGTTTTAGCCTCTTTTGCCAGGCTGCTTTGGAAGTACCAAGGATTCTGAGTTTAAATTCCAATAAACATTTCTCTGGACCATATGGTGAAAATGTCATTTTCGTTGCCAATGATTGGCACACTGCCCTTATCCCTTGCTACTTGAAAAGTATGTACCAATCAGTGGGCATCTATATGAATGCCCGGGTTGTTTTTTGTATCCACAACATTGCTTACCAAGGAAGATTTGCATTTGCCGACTTTTCCCTTCTAAATCTCCCTGACCAATTCAAGAGCTCCTTTGACTTTATTGATGGGCATCTTAAACCAGTGATGGGAAGGAAAATCAATTGGTTGAAAGCTGCAATTATAGAAGCATGGTTTGTGATAACTGTTAGTCCAAACTATGCTGAAGAACTATTGTCAGGTCCAGACAAAGGAGTGGAATTGGACAACATCCTTCGCAAAGTTCAGGATCGTTTTATTGGAATTGTGAATGGCATGGATGTTCAGGAATGGAATCCATCCACCGACAAATATATAGCTGTCAAATACGATGCTGCAACAGTATTGGAAGCAAAGGCTCTTCTGAAAGAAGCTCTCCAAGCAGAAGTTGGATTGCCGGTTGACAGAAACATTCCTCTCATAGGTTTCATTGGTAGACTTGAAGAGCAAAAAGGTTCTGACATTCTTGCAGAAGCCATTCCCCAATTTATCAAGGAGAATGTTCAGTTGGTAGCCCTAGGAACAGGAAAAAAACAAATGGAAAAACAACTTGAGGAACTTGAAGTATCATACCCTAACAAGGCCAGAGGAGTGGCAAAATTCAATGTTCCCCTAGCCCACATGATAATTGCTGGAGCTGATTTTATATTGGTTCCTAGTAGATTTGAGCCTTGTGGTCTCATTCAGTTACAAGCTATGCGCTATGGATCAGTACCTATTGTTGCCTCAACAGGTGGGTTAGTTGACACTGTCAAAGAAGGTTTCACTGGATTTCAGATGGGTGCCTTCAATGTTGAATGTGATGCTGTTGATCCTGTTGATGTGGATGCCATAGCAAAGACCGTCAAAAGGGCCCTTGCAGTCCATGGAACTCCAGCTTTTTCAGAAATGATCAAGAACTGCATGGCTCAAGATCTTTCATGGAAGATTCACCTGAAGAATTTTGTTCAGAAGTTGTTCCAGCGGTTTGTGAAGCATATGCTCTTGTTCCTATCCCCTCTGTTGTTGTTGTTGTAA 2063 0.4237 MAALTASSNLVSGSSNVHHRLSASSYESKAVTMGLRSLKQSSIHSGLRILNPVDELLNRTSIKSYAVEAKRKGLQSKNVKPKGTITCGMTFIFIGMEVAPWSKTGGLGDVLGGLPPALAAFGHRVMTISPRYDQYKDAWDTSVVIEVKVGSRIEKVRFFHCYKRGVDRVFVDHPWFLAKVWGKTGTKLYGPTTGDDYEDNQLRFSLFCQAALEVPRILSLNSNKHFSGPYGENVIFVANDWHTALIPCYLKSMYQSVGIYMNARVVFCIHNIAYQGRFAFADFSLLNLPDQFKSSFDFIDGHLKPVMGRKINWLKAAIIEAWFVITVSPNYAEELLSGPDKGVELDNILRKVQDRFIGIVNGMDVQEWNPSTDKYIAVKYDAATVLEAKALLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILAEAIPQFIKENVQLVALGTGKKQMEKQLEELEVSYPNKARGVAKFNVPLAHMIIAGADFILVPSRFEPCGLIQLQAMRYGSVPIVASTGGLVDTVKEGFTGFQMGAFNVECDAVDPVDVDAIAKTVKRALAVHGTPAFSEMIKNCMAQDLSWKIHLKNFVQKLFQRFVKHMLLFLSPLLLLL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01604 608 Gene3D Glycogen Phosphorylase B; 92 579 - -
Pste6g01604 608 Gene3D Glycogen Phosphorylase B; 364 574 - -
Pste6g01604 608 Hamap Glycogen synthase [glgA]. 89 593 IPR011835 GO:0004373
Pste6g01604 608 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 67 589 - -
Pste6g01604 608 FunFam Starch synthase, chloroplastic/amyloplastic 90 368 - -
Pste6g01604 608 NCBIfam glycogen/starch synthase, ADP-glucose type 89 587 IPR011835 GO:0004373
Pste6g01604 608 CDD GT5_Glycogen_synthase_DULL1-like 92 579 - -
Pste6g01604 608 Pfam Glycosyl transferases group 1 408 530 IPR001296 GO:0016757
Pste6g01604 608 FunFam Starch synthase, chloroplastic/amyloplastic 369 574 - -
Pste6g01604 608 Pfam Starch synthase catalytic domain 92 351 IPR013534 -
Pste6g01604 608 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 84 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01604 Pste-Chr6 6982538 6988826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01604 1 579 Glycosyltransferase AT1G32900 69.363 0.0 800
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01604 6 6982538 6988826 Pste6g01604 6 6982538 6988826 ECH