Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01600 TTGCAATGTTGATTTTGTTGGAACCATTTTTTACCTCTAAAAAAGCTGTATATTCAGTAAAAATAATAAAAGAAGCAAGAGGTTTAGGTAGCACAGCATGGAGCTGGATCTCCGTTCATTCGTTCACTCTGGCACCTCCACCTCCGCCTCCGACTCCGACCCCGACGACGGTCCTCACCGCAGCATCGACGATATTCTCAACGACTGTGACACTTCCTCGTCACCCTCCCCTCCTTCTTCCCCCTCTCACTTCCTCACCAATAATTCCCATCCTCAAAACCCCATACTCCAACAAAAACCACCCGATTCTTTTTCCCGTCTCAAATCCCCTGACTTCTCCGATCGCACCCGTCTCTCTCGCCCCTTCTCCTCTCTCCTCCACGGCGTTCGCTCCAATGCCAAGCCCGGTGCAGCACTCGCCGCCGCAGCCGCCGCGTCTCGATCTGTTCCTACCCCGCACGCCGCCGCGATTATCTCCAGGAGGAAATCTGCGGCTGCTAACTTTTCCGAATCGACTTCGATCGCCGCCACCGGCGATGAGAGTTCCGATGCTTCTTCCAAAGCCGAATTCGGCGAGCCTAGTGAGAAAATCGAGACTCAATCTAGTGAAAGTGCTTGTGTTGTGGATGAACGATTTGAGAGTGATGCAGAAATTGCCACTGATTTGAAGGCTAGTAGTTCTGCTGAGACTCAGTTGCACAGTGATGATAATAAAATTGATAAATACAATGATAATGCTAATGATTCTTCTATGGTGAGTGAGGAGAAGAGGGAATTGAGTGAGATCGACCATGATGAAGGGAAGGACGTGAATTCTGCACCATTTGATGATGATGATCGTGGTGAGAGTGATGGTGGCGATGAGAGAATCACAGCCGCGGAAGAAACTGCGGGAACAGAAGTAGTAGTGAATAATGGTAGTTGCTCTATGGAAGATGTTAATAAAGAGGTGAGCATTGTTGGTGGGGATGAAGGTAGTTCATTTGGTGAGGTAGTGGAAGAGAGACTTGAGGAATTGGAAAGCAAAAGGGCTGCTAAGAGAGCAGAGAAGAAACGAGAGTCTTGGATGAAGCCGCTTGAATTGGCTGAAGAACTGGAGAAGAAACGTGCTTCAACTGGTCTGCATTTGGAAGAGGGTGCTGCAGCCCAGCCAATGAGGCTCGAGGGTGTTCGGAGAGGCTCCTCCACGTTAGGATACTTTGATGTTGATGCCGATAATGTATTCACGAGGGCCATTTCGTCCCACACTTTCAGGCGTGAGCAAGGTTCCGCCCGAGCCTTGGCTGTTCACGCTAATTACATTGCAGTAGGAATGTCAAAAGGGCTCATAGTTTTGTTTCCTACTAAATATTCCATTCATCATGCTGACAACACTGATGGAAAGATGTTGATGCTTGCTATACAAGGTGATCGGTTGCATGCTCCTGTGACATCCATGTCTATCAATCAGCAAGGAGACCTTCTTTTGGCTGGTTATGGTGATGGTCACCTTACACTGTGGGATGTACAGAAAGGGATAGTGGCAAAAGTTATTAGTGGTGAGCATGCAGCACCAGTAGTGCATACATTGTTTCTAGGGCAGGATCCTCAGAATACTCGGCAATTTAAAGCAGTTACTGGTGATTGTAAGGGTTTGGTTCTCTACCACATTATCTCAGTGGTTCCTTTGTTTAGTAGATTCTCCATCAAAACTCAGTGTCTTCTTGATGGGCAAAGTACGGGCTTGGTGCTTTCAGCTTCACCACTTCTTTTTGATGACTTCAGTGGAAGTGCTTCACCTTTTACCCAGGGAAACACCTCGGCCTCAGCCAGCAGTATAAGCAGCATGATGGGAGGTGTTGTTGGTGGTGATGCTGGCTGGAAACTGTTCAACGAAGGGCCTTCTTTGGTTGAAGAAGGCGTGGTTGTATTTGTCACCCATCAAACTGCTTTGGTGGTACGGCTGAGCCCTACATTGCAAGTCTATGCTCAACTCTCTAGGCCAGATGGAGTTCGGGAGGGTTCTATGCCATATACTGCATGGAAATACATGACACAAACATGTAGTTCTACTGAAAATGTGTCTGCAGAATCTGTAGAAAGGGTTTCATTGCTAGCAATTGCTTGGGAACGTAAGGTTCTGGTTGCAAAGTTGGTTAAATCGGAATTAAAAGTATATGGGAGATGGTCTCTTGACTGTGCAGCTATAGGTCTAGTATGGTTGGATGATCAGATGCTGGTAGTTCTCTCTTCAAGTGGACAACTGTATTTATTTTCCAAGGATGGAACTGTAATTCACCAAACGAGTTTTGCTGTAGATGGTATTGGAGGAGATGATCTAGTCTCTTATCATACTCACTTCATCAATATATTTGGAAATCCTGAGAAATCTTATCATAACTCTGTTGCTGTAAGAGGAGCTTCTATTTATATACTTGGTCCAATGCATCTCCTTGTTTCTCGTCTTCTCCCTTGGAAAGAACGTATTTCTGTTTTGCGGAAAGCTGGTGACTGGATGGGTGCCCTGAACATGGCAATGACGTTTTATGATGGCCATGCTCATGGGGTTGTTGACCTTCCTAGAACCTTGGATGCTGTACATGAGGCTATAATGCCCTTCTTGTTGGATTTGCTTACATCATATGTTGATGAAGTGTTCTCCTATATTTCAGTAGCATTCTGCAACCAAATTGAAAAACTGGACCAATCAGATGATTCAAATAGTAGAAGCAATTCAGTGCATTCTGAGATAAAGGAGCAATACGCCCGTGTTGGTGGAGTTGCTGTAGAATTTTGTTGTCATATCAAACGAACTGACATTCTTTTTGATGAAATTTTCTCTAAGTTTGTGGATGTTCATCAGAGAGAAACATTTTTGGAGCTCCTGGAGCCATATATTTTGAAGGACATGCTTGGATCTCTACCTCCTGAGATTATGCAAGAACTGGTAGAGTATTATAGCACCAAAGGGTGGTTACAGCGAGTTGAGCAATGTGTGCTTCACATGGATATATCATCCTTGGATTTTAATCAGGTTGTCAGATTATGCCGGGAGCATGGATTATATAGTGCCCTGGTGTATGTCTTCAATAAAGGATTGGATGATTTTAGGGCACCTCTGGAGGAGCTGTTTGCTGTCTTACAAAATAGCCAAAAGGAAAGTGCTACTGCACTCGGGTATCGAATGCTGGTTTATCTCAAGTACTGCTTTACTGGTCTTCCCTTTCCACCAGGCCGTGGAGCTATTCCTCCCACACGCTTACCATCTCTTAGAAGAGAACTTGTAGAGTTTTTGTTGAAGGACACCTGTACTACGAAATCACAGACAGTTTCAGACTTTGTTTCCAGACAATCCCACCTGAATCTTTATCTTCTCTTGAAGTTAGATGCTGAAGCTACATTAGAAGTACTCAGATGTGCTTTCAAGGAAGATGAAATTTCAAATGCCAGCTCATCTTCACTAGATTTAGCCAATAAACCTGTAGAGGAAGCAAAAAAGGAAAATGATAATGTTACTAAAACTGAAAATGCTTTGGTTCAGAACACAGTTGATGCTCTTATTCAAATAATTGATATGAATATTATTCCCACAGACACAACCTTGAGTAGTGGTGATGATGTGTCAAAAAAAGAATGGCCTTCCAAGGACATGGGTTATATGTTTGAGTTCATTGCATATTATGTTACCCTCCGAAAGGCTAAGATTTCAAAGGGTGTGTTTTGTCAAATTTTTAAATATTTGACATCAAATAGTCACTTCTCAACTAATGCTTCTGTCCATGATTCAACTCCAAAAAATAGAGAGAAGCAAGTACTTGCACTTTTGGAAGTACTTCCTGAATCAGACTGGGATGCATCATTTGTGTTAGATCTATGTGAGAGAGCCAAATATCATCAGGTTTGTGGATTGATCCATAGTATCAGACACGAATATGTGGCTGCATTAGATAGTTATATGAAAGATGTAGATGAGCCTGTTCATGCCTTCTCCTTTATTAACAGAGCATTCTCACAGTTGGGTGGCAAGGATCATGCTTCTTTTCGATCAGCAGTCATATTGCGAATTCCTGAGTTAGTTGAGTTAAGCAGGGAGGGTGCATTCCATATGGTTCAGAGTCATTTTCGCGATGAGAGTTCCCGTATCATAACTGAACTTGACTCTCATCAAAGGAGTCTTTTCCTTTATTTAAAGACACTCATTGAGCTTCACTTATTTGGCACCCTAGACTTGTCTAATTTAAGAAAGGATGATACTTTGCATGCCCTTAATGGAAGGCAGGTTAAGGATCACTCACAACAAGAAGTTAGAGATTACTTAGAGAATATATCTAATTTTCCCAAGTACATGCGTGAAAATCCTATTAACGTGCCTGATGATCTTATTGAGCTTTACCTTGAGTTATTATGCCAGTATGAAGGTGGTTCAGTTCTCAAGTTTCTGGAAATGTTTGATAGCTATCGAGTTGAACATTGTTTACGCCTGTGCCAAGAATATGGCATTATAGATGCATCTGCATTCTTATTAGAAAGGGTTGGTGATGTTGGTAGAGCTCTCTTACTTACACTTTCTGATCTAAATGACAAGTTTGTTAAGCTTAATGCTGCTGTAGAAGCTGTAGTTTTAAATCATCACAGAGTTGGTTCGTCACACATGGAATTATTCAACAGTGTTTTAAGAACAAAGGAGGTAAGTGACATCCGCAATTTACTGCATGCCTGTATTGGTCTGTGTCAGCGAAACACTCCTCGTCTAAATCTTGAGGAGTCAGAGGCACATTGGTTTAAATTACTTGACTCAATGCAAGCAGATTCCCAACTGGACAAAGATACCTCTAAAAGCAGTTGGAAAATTTCCAAGTCCCGGAATGGCAATATCTTGAGAAAATTGCTATCACAGTTCATTAAAGAGATTGTTGAGGGAATGATTGGTTTTGTTCACCTTCCAACTATCATGTCTAAACTCCTGTCTGATAATGGAAATCAAGAATTTGGAGATTTTAAACTTACCATATTGGGAATGTTGGGAACATATGGCTTTGAAAGAAGAATTCTGGATGCTGCCAAATCATTAATAGAGGATGATTCTTTTTATACCATGAGTTTACTCAAGAAAGGGGCCTCCCATGGATATGCTCCCAGGAGTCCCGTCTGCTGCATTTGTAATTGCCTCCTTACAAAGAACTCAGTTGGCTCTGGAATTCGGATTTTCAACTGTGGCCATGCAATTCATCTCCAATGTGAAGTTTCGGAAATTGAGGCATCAAGCAAAGGATCTACATCTGGATGCCCTGTATGCATGCCGAATCAGAAATCCCAGCAGTCTAGAAACAAATCAATCGTTGCTGCAAATGGCTTGGTCAATAAATTCTCATCAAGGCGTCAATATCCTCATGGAAGTACCATTCATCCTTACGACAGTGATTTATCAGATAATATGTATGGACAACAACAGATATCACGGTTTGAGATCTTGAGCAACTTGCAGAAGAATCAGAGATTTATGCAAATAGAAAACTTGCCGCCGTTGAAGCTCGCCCCACCTGCTGTTTACCATGAAAAGGTAAGTAAAGTGACGGACTTTCTGCCAGGGGAAAGTAGCAATAGTTCTGCTGCTATTGTTAAACAAAGTAGAAACAAGCAAAACCGGGAGCTGAGAGTTAAGGGCTCATCAATTCGATTTCCTTTAAAATCAAGTATATTTGGCAAGGAGAAGACCAATAAGCGGTGACTAACTGTTTCTTAAGAACAAGAGAACAGTTTAGGCGAGAGAGATCAAGCACTAACAACTGTACGGACTAACAATAGATATCTTCCCCCCTAGTTTGTCAGTGGAGCTACCCGCTTTGATGCAGCTCAATCCATTCTTATTCTTTTGTATTTGAATCTCCTTCATGTACATTTTACTAACTGCTGTATATGCGTGTTATATAACAAAGTTCTGTAAGTGTAAAATAGAAAAGCCATTTTGAGTGTCTTCAAGATATTCGAATGAATTCAATCAAACGATGACCAAACTCTCGCC 6001 0.4223 MELDLRSFVHSGTSTSASDSDPDDGPHRSIDDILNDCDTSSSPSPPSSPSHFLTNNSHPQNPILQQKPPDSFSRLKSPDFSDRTRLSRPFSSLLHGVRSNAKPGAALAAAAAASRSVPTPHAAAIISRRKSAAANFSESTSIAATGDESSDASSKAEFGEPSEKIETQSSESACVVDERFESDAEIATDLKASSSAETQLHSDDNKIDKYNDNANDSSMVSEEKRELSEIDHDEGKDVNSAPFDDDDRGESDGGDERITAAEETAGTEVVVNNGSCSMEDVNKEVSIVGGDEGSSFGEVVEERLEELESKRAAKRAEKKRESWMKPLELAEELEKKRASTGLHLEEGAAAQPMRLEGVRRGSSTLGYFDVDADNVFTRAISSHTFRREQGSARALAVHANYIAVGMSKGLIVLFPTKYSIHHADNTDGKMLMLAIQGDRLHAPVTSMSINQQGDLLLAGYGDGHLTLWDVQKGIVAKVISGEHAAPVVHTLFLGQDPQNTRQFKAVTGDCKGLVLYHIISVVPLFSRFSIKTQCLLDGQSTGLVLSASPLLFDDFSGSASPFTQGNTSASASSISSMMGGVVGGDAGWKLFNEGPSLVEEGVVVFVTHQTALVVRLSPTLQVYAQLSRPDGVREGSMPYTAWKYMTQTCSSTENVSAESVERVSLLAIAWERKVLVAKLVKSELKVYGRWSLDCAAIGLVWLDDQMLVVLSSSGQLYLFSKDGTVIHQTSFAVDGIGGDDLVSYHTHFINIFGNPEKSYHNSVAVRGASIYILGPMHLLVSRLLPWKERISVLRKAGDWMGALNMAMTFYDGHAHGVVDLPRTLDAVHEAIMPFLLDLLTSYVDEVFSYISVAFCNQIEKLDQSDDSNSRSNSVHSEIKEQYARVGGVAVEFCCHIKRTDILFDEIFSKFVDVHQRETFLELLEPYILKDMLGSLPPEIMQELVEYYSTKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALVYVFNKGLDDFRAPLEELFAVLQNSQKESATALGYRMLVYLKYCFTGLPFPPGRGAIPPTRLPSLRRELVEFLLKDTCTTKSQTVSDFVSRQSHLNLYLLLKLDAEATLEVLRCAFKEDEISNASSSSLDLANKPVEEAKKENDNVTKTENALVQNTVDALIQIIDMNIIPTDTTLSSGDDVSKKEWPSKDMGYMFEFIAYYVTLRKAKISKGVFCQIFKYLTSNSHFSTNASVHDSTPKNREKQVLALLEVLPESDWDASFVLDLCERAKYHQVCGLIHSIRHEYVAALDSYMKDVDEPVHAFSFINRAFSQLGGKDHASFRSAVILRIPELVELSREGAFHMVQSHFRDESSRIITELDSHQRSLFLYLKTLIELHLFGTLDLSNLRKDDTLHALNGRQVKDHSQQEVRDYLENISNFPKYMRENPINVPDDLIELYLELLCQYEGGSVLKFLEMFDSYRVEHCLRLCQEYGIIDASAFLLERVGDVGRALLLTLSDLNDKFVKLNAAVEAVVLNHHRVGSSHMELFNSVLRTKEVSDIRNLLHACIGLCQRNTPRLNLEESEAHWFKLLDSMQADSQLDKDTSKSSWKISKSRNGNILRKLLSQFIKEIVEGMIGFVHLPTIMSKLLSDNGNQEFGDFKLTILGMLGTYGFERRILDAAKSLIEDDSFYTMSLLKKGASHGYAPRSPVCCICNCLLTKNSVGSGIRIFNCGHAIHLQCEVSEIEASSKGSTSGCPVCMPNQKSQQSRNKSIVAANGLVNKFSSRRQYPHGSTIHPYDSDLSDNMYGQQQISRFEILSNLQKNQRFMQIENLPPLKLAPPAVYHEKVSKVTDFLPGESSNSSAAIVKQSRNKQNRELRVKGSSIRFPLKSSIFGKEKTNKR 1869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01600 1869 MobiDBLite consensus disorder prediction 35 72 - -
Pste6g01600 1869 MobiDBLite consensus disorder prediction 132 152 - -
Pste6g01600 1869 Pfam Golgi CORVET complex core vacuolar protein 8 918 1102 IPR025941 -
Pste6g01600 1869 Pfam Region in Clathrin and VPS 1394 1488 IPR000547 GO:0006886|GO:0016192
Pste6g01600 1869 ProSitePatterns Trp-Asp (WD) repeats signature. 456 470 IPR019775 -
Pste6g01600 1869 MobiDBLite consensus disorder prediction 128 267 - -
Pste6g01600 1869 SUPERFAMILY RING/U-box 1677 1729 - -
Pste6g01600 1869 Gene3D - 364 507 IPR015943 GO:0005515
Pste6g01600 1869 Coils Coil 1122 1142 - -
Pste6g01600 1869 MobiDBLite consensus disorder prediction 218 262 - -
Pste6g01600 1869 PANTHER VACUOLAR PROTEIN SORTING VPS41 228 1799 IPR045111 GO:0006623
Pste6g01600 1869 CDD RING-H2 1678 1727 - -
Pste6g01600 1869 ProSiteProfiles Trp-Asp (WD) repeats profile. 444 478 IPR001680 GO:0005515
Pste6g01600 1869 Coils Coil 297 317 - -
Pste6g01600 1869 MobiDBLite consensus disorder prediction 1822 1838 - -
Pste6g01600 1869 ProSiteProfiles Zinc finger RING-type profile. 1678 1726 IPR001841 -
Pste6g01600 1869 MobiDBLite consensus disorder prediction 1822 1848 - -
Pste6g01600 1869 MobiDBLite consensus disorder prediction 1 104 - -
Pste6g01600 1869 SUPERFAMILY WD40 repeat-like 383 718 IPR036322 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01600 6 6958990 6972326 Pste6g01600 6 6958990 6972326 ECH