Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01502 AAAGATTCCTTTGTGAAGCACATCACATGAACCAGCACACTGCTGTAACCTTAAATCACTGTCCTTGTCCTGTCTTCCGTGTTTCTTCTTCTCTTAGCATTCCCAAATCAAATCCCTCTCTCTTTATATTTAATTGCTCACTCATCACAACGCTAACCACGAGAGAGAGAGAGAGAGAAAGGTGTGGTTTGCAAAAAGTGAGAGATAGAAGAAGAATCCAGATTATGTTCAATAATTCACTCCCATAATCCGTGACCCATTTCAGATTTCATCTTAAGCACGTAAATTTGAGTTCAAAACTTTACCTTTATTCACTGTGGTGAGGATCTTGAGAATGGTAGGTGATTCTATGAAAAAGAGTCTTTATTTGATTTGAATTTTTTGGGAAGGTGAATTTGAAATAAAAAGGGGTTATTTTGATTTTTGATTGTGGTTACTAATTAGGCGTGTTGGTATGAGTGGAATTCAGGTGGTGGCTGCGGGTGGTAAGTTCATTTTGAGAAGAGGTAATGGTTCTTCTCACAATGTTGTGAATGGTTATAGCAGTGATGGAGATCTTTCCAGAATTAATAAGAGGGCATCGGCAGCAGAGGTGGATAGAGACCCTTCCTGCGTTTCATTCACCACTTTCAACATTTTGGCTCCGATTTACAAACGGGTCGATCCACAGAACCAAGGCCTACGAGAAAGTGACTTCAGATCGTTCTGGTTGGCCAGGAATGAAGGGATTCTTGATTCCTTGCTTTCTGAACCATCTTCCATTATATGCCTCCAGGAATTTTGGGTTGGAAATGAAGAGCTTGTCCACATGTATGAGGAGAGACTTGGGGATGCTGGCTATCTTCTCTTCAAGCTTGCTCGAACCAATAACCGTGGAGATGGTCTGATGACTGCTATACGCAAAGAATGTCTCAGAGTTATGGATTATAAAGAATTGCTTTTTAACGATTGTGGTGATCGCGTTGCTCAGTTGTTACATGTTCAGTCAGTCACCTCCTTTTTACAAAACCAAAATGGTAGTGTTCTCCAAGAGTTTCTGATCGTGAACACCCACTTGTTGTTTCCTCATGATTCAAGTTTGTGCGTAGTGAGATTGAACCAGGTTCACCGAATATTGCAATACGTGGAATTGTATCAGAGAGAAAACAGGCTCAAACCCATGCCTATTATACTCTGTGGTGACTGGAATGGAAGCAAGCGAGGGCATGTTTACAAGTTCCTTAGGTCACAGGGATTTGTATCATCATATGATATTGCTAATAAATACAGTGACAGTTATGCAGATGCTCACAAGTGGGTTAGTCACCGAAATCATAGAGGAAATATCTGTGGTGTTGACTTCATTTGGCTTTGCAATCCCAATCAAGCACGTAAGCCGTTGAAGACAAGTTGGGCTGAAGCTGTATTTAGTATACTAAAATTCCAATTACGAAAAGCATCATTGTCTGAAGATGATGCATTTGCCTTTCTGAAGGGTGACAACTATGCTGATTCTGTGACATATTTTAGTTTCTCAGAAGCACTCCGACAGGTAAAATTAATTGGTGTGCCTTATGGACTATGCTTTCAACAGTTGCAAGATCTATGGAATCAAGCAGATGTTGATGGAAATGGTGTCATCGACTTTGAAGAATTCAAGCAGAAAATATGGAATTCTACATGTCCAGAGCATGTGTTGGAAAATATGAATAGGTGCATGGAAGATGGTAACACAGAACAGGAGCAGCAAGAAGCCATTGGTTTTAAGGTGAAGATTGCAATGCTGTATCCGCGTGAAGTGGAGAGAGGACATTGGCCAGAAGGTTATTCTCTTTCTGATCATGCTAGACTCACAGCTGTGTTTTCACCAGCAAGGATGCGATGTTCTCCCCCACAAAACAGTACTTAGCTAGCTGGCTATTTCATGGCACCATTAGTTTAGACCCTATTAGAGTCAACCAAAAAAAATGTGGAAATATAAGCTATAGCCCACATAAAAAATTTCATTTTTGGACAAGTTTGGCATAGGGGTATACGATAAGTGATAAATTTTCTCTTTCACTTTTAATCCCTTACCAAACATGTCATGCCATTAGTGATTAGTCTGTCTTGTATATGTGTGGAGTCGAATTAAAGTAGTTTATGCATTGCTCTAATCAGTTTTAGTAAAGCCCTGGCCAACGCTTTTTTATGGTAATGGGATAACAATGTAATGATATTTTTGCAATGAAAAAATGGATGTGCATATTATC 2231 0.3971 MSGIQVVAAGGKFILRRGNGSSHNVVNGYSSDGDLSRINKRASAAEVDRDPSCVSFTTFNILAPIYKRVDPQNQGLRESDFRSFWLARNEGILDSLLSEPSSIICLQEFWVGNEELVHMYEERLGDAGYLLFKLARTNNRGDGLMTAIRKECLRVMDYKELLFNDCGDRVAQLLHVQSVTSFLQNQNGSVLQEFLIVNTHLLFPHDSSLCVVRLNQVHRILQYVELYQRENRLKPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDIANKYSDSYADAHKWVSHRNHRGNICGVDFIWLCNPNQARKPLKTSWAEAVFSILKFQLRKASLSEDDAFAFLKGDNYADSVTYFSFSEALRQVKLIGVPYGLCFQQLQDLWNQADVDGNGVIDFEEFKQKIWNSTCPEHVLENMNRCMEDGNTEQEQQEAIGFKVKIAMLYPREVERGHWPEGYSLSDHARLTAVFSPARMRCSPPQNST 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01502 477 Gene3D - 335 433 - -
Pste6g01502 477 ProSiteProfiles EF-hand calcium-binding domain profile. 369 404 IPR002048 GO:0005509
Pste6g01502 477 ProSitePatterns EF-hand calcium-binding domain. 382 394 IPR018247 -
Pste6g01502 477 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 34 463 - -
Pste6g01502 477 SUPERFAMILY EF-hand 351 399 IPR011992 -
Pste6g01502 477 Pfam Endonuclease/Exonuclease/phosphatase family 88 269 IPR005135 GO:0003824
Pste6g01502 477 FunFam Putative calcium-binding protein 39 467 - -
Pste6g01502 477 Gene3D Endonuclease/exonuclease/phosphatase 34 334 IPR036691 -
Pste6g01502 477 SUPERFAMILY DNase I-like 47 267 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01502 Pste-Chr6 6542466 6546583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01502 119 471 EF-hand Containing Proteins AT1G02270 61.667 4.14e-165 468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01502 6 6542466 6546583 Pste6g01502 6 6542466 6546583 ECH