Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01498 atggcttccaaggctgctcttctcatgtgtctcaatgtcctgttcttcactgtggttagctccacatatgtcccatgcaacccacccccaaagttcccacacaccaccttcccaaaagccacttgccctttggacacccttaagtttggtgtgtgtgctgatctgttaggtttgattaacgtgcaactggggaagccaccaaagaccccatgctgcaacctcattcagggtctcgctgatcttgaagctgccgtctgcctttgcactgctctcaaggctaatgtcttgggcatcaacctcaacgttcccatcaagttgagcttgctactcaactactgtggaaagggtattcccaagggattcgggtggtggcagtggcgatcgtgggggttgacgacggtggtagtgctgtcccaaatcgccactaccactgacatcgtcaccacccctattgtcgttgcatcagagtcaataccatcacccttactaccgatgccgccaccaccaccgtcagtacctctaccgctaccgttgacggtggcaacagtaccaacggaggtggtggcgatcttgcataggatccacagggttgacgagagagttattgtgtga 612 0.0 MASKAALLMCLNVLFFTVVSSTYVPCNPPPKFPHTTFPKATCPLDTLKFGVCADLLGLINVQLGKPPKTPCCNLIQGLADLEAAVCLCTALKANVLGINLNVPIKLSLLLNYCGKGIPKGFGWWQWRSWGLTTVVVLSQIATTTDIVTTPIVVASESIPSPLLPMPPPPPSVPLPLPLTVATVPTEVVAILHRIHRVDERVIV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01498 203 SMART aai_6 42 113 IPR016140 -
Pste6g01498 203 PANTHER - 3 121 - -
Pste6g01498 203 FunFam pEARLI1-like lipid transfer protein 1 40 123 - -
Pste6g01498 203 Gene3D - 39 122 IPR036312 -
Pste6g01498 203 CDD HPS_like 40 122 IPR027923 -
Pste6g01498 203 Pfam Hydrophobic seed protein 41 121 IPR027923 -
Pste6g01498 203 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 45 122 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01498 Pste-Chr6 6533596 6536446 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01498 40 121 Acyl Lipid Metabolism Gene Families AT4G22490 32.927 1.74e-09 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01498 6 6533596 6536446 Pste6g01498 6 6533596 6536446 ECH