Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01490 atgttcttcatcttgaaaatattaatgctaaacgctttgccaccaatatatgcatgcggttcctgcactgcgccacgtcaccccaaacggccaccgcatcacggaggaggccggccaaaagtgtcccctccgctgccgccgatcataatcaaccctccggtggtgatataccctccgccaatctcaccgccgtacccgccgccacaaggtggtggttcccctcctcaacggacatgcccaattgatgccctaaaactaggactttgcttggatgtgcttggagggttagtgcatgtggggataggggaccctgttgagaacgtgtgctgtcccgttatacaagggttgcttgatcttgaagctgcaatttgcctttgcactgttattagggttaagcttcttaacctcaatgtcttcctccctcttgcccttcaagtcttgatcacttgtggcaagactcctcctcctggttttatttgtccacctctcaaataa 495 0.0 MFFILKILMLNALPPIYACGSCTAPRHPKRPPHHGGGRPKVSPPLPPIIINPPVVIYPPPISPPYPPPQGGGSPPQRTCPIDALKLGLCLDVLGGLVHVGIGDPVENVCCPVIQGLLDLEAAICLCTVIRVKLLNLNVFLPLALQVLITCGKTPPPGFICPPLK 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01490 164 Gene3D - 77 162 IPR036312 -
Pste6g01490 164 PANTHER - 3 160 - -
Pste6g01490 164 CDD HPS_like 78 160 IPR027923 -
Pste6g01490 164 Pfam Hydrophobic seed protein 78 161 IPR027923 -
Pste6g01490 164 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 81 162 IPR036312 -
Pste6g01490 164 SMART aai_6 79 160 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01490 Pste-Chr6 6487605 6488686 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01490 61 162 Acyl Lipid Metabolism Gene Families AT4G22490 33.333 1.86e-10 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01490 6 6487605 6488686 Pste6g01490 6 6487605 6488686 ECH