Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01454 atggttgatttcatcatgtcttccaaaaccagctcgtcccttgctattttcataactctcaacattctcttctttgcctttgtctctggtcgcgtgggctgtccgcggccgccctcacgtggctcagatgcctcgtgccccgttgatgtaatcaaactaggagtatgtgcgaatgtgctaaacgggttggtgaacgtggctttgggtcaaccactagttatcccttgttgctccctcctcagtggtctcgttgaccttgaagttgcagtgtgcctctgcactgccttcagaggaaacattttgggcatcaatctcaaccttcccatttcactcaacttgcttctcaacatttgctccacacaagtcccacgtagatttcaatctgcctaa 390 0.0 MVDFIMSSKTSSSLAIFITLNILFFAFVSGRVGCPRPPSRGSDASCPVDVIKLGVCANVLNGLVNVALGQPLVIPCCSLLSGLVDLEVAVCLCTAFRGNILGINLNLPISLNLLLNICSTQVPRRFQSA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01454 129 SMART aai_6 46 118 IPR016140 -
Pste6g01454 129 PANTHER - 11 127 - -
Pste6g01454 129 CDD HPS_like 44 127 IPR027923 -
Pste6g01454 129 Gene3D - 43 129 IPR036312 -
Pste6g01454 129 Pfam Hydrophobic seed protein 46 127 IPR027923 -
Pste6g01454 129 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 49 127 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01454 Pste-Chr6 6332519 6332990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01454 6 127 Acyl Lipid Metabolism Gene Families AT4G22520 30.645 3.98e-11 54.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01454 6 6332519 6332990 Pste6g01454 6 6332519 6332990 ECH