Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01449 GGAAGTTTCACTCTGAAAATCTGATTGGAGAAAAAGTAGTTGTGAATTGTGAATTGTGAATTGTGATGATGCTGTATAACACTCGATCCAGCACATAACAATGGAAACGACGCAGCTTAACGTCCTCTCTCTCTAGACCCTGCCTCAACGACGTCGTTTTGGAGCTCTCGCCCCTTTGCTTCGCTTCCCTGTCTCTGTAACCGAAAGGGGGAAAACATAATTAACGCCGATTTCGCAACCAACTCGACGAATCAACCAGAAATTGGATCTCAGGGTGTTTGTGTGGCTGGAATTGCTTCAGTCTTGGAATCAAAGAAGGGGCGTGATATTGAAAGGGGGATTCTATGGAGATGCTGTAATTTAGGGTTGGATTGGTTCTGACAGTCATTGGGAGCAGAAATTGTATGTTTAGAGTGAGCAAGTTCTTAGCAGGAAACAGAAATTGCATTTGAGTATAAAATAACAGAGTATAGCATAGAGAATTGTTCTTGATACAGTGCTAAATTTGTTGAATGGCGGAGAAATCATGCATCAAACGCCTTCAGAAGGAATATAGAGCCCTTTGTAAAGAGCCAGTTTCTCATGTTGTGGCTTGTCCTTCACCAAGTGATATTCTTGAGTGGCATTATGTGTTGGAGGGAAGTGAAGGAACCCCTTTTGCAGGTGGATATTACTATGGAAAGATTAAGTTTCCTCCTGAATATCCATATAAACCTCCTGGAATCAGCATGATTACACCTAATGGACGGTTCATGACACAGAAAAAGATCTGTTTATCTATGAGTGACTTTCACCCAGAAAGTTGGAATCCCATGTGGTGTGTATCAAGCATCTTAACAGGGCTTCTTTCATTCATGATGGACACCAGTCCAACCACTGGCAGTGTAAACACCACCACTGCTGAGAAGCAGCGTCTAGCAAAATCTTCCCTTTCTTTCAACTGTAAGAATGCAACATTCAGGAAGATGTTCCCTGAATATGTGGAGAAGTACAACCAGCAACAGCTTTCTGAGCAGGCTGCTCCAGAGAGGGTCTCATCAGAGACGTCACCTGACAAAAGTTCAAGGCCAGTTTTGGAAAAGAAATTAGAAACCACAGGAGAAGAAATGAGAAGAGTAGATGGGATAAAGGATGTGAGAAAAAACAGAAAACCATTTCCAACGTGGATGATGTTATTACTTTTCTCCATATTTGGGGTTGTAATGGCGTTACCTCTGCTTCAGCTGTGATGATAGGCAAATGAATCTTTAATAGGAGGTATAAGAGTCCACAAAGTGTTCTCCTGGAACTGGTACTATATGTTCTGCTTAGGTTGTCATGTCTAACAGAATTTGTATAGGGAATGATGGGCATGGAGGCTGCGTTTACTATGGGCTGATTTTACTCCTTTGTGTCTATGTTGCCAGCTTCTTGGTGATGAATGCTAAGAAGTTACATGCTTGATACTTATGATTTTCGGCTAAATGTTTTTGAGGTTTGTCTAGTAGTGTTGTTGTTCACACTGCACATCCTGCTTGCAACAATGTGCTTTTTAGAATTGGTAAATTATATCCCGATTAAACCATTAACGTAATCCGCAGTAAAATTTTTATCAGTGTATAAATAGTGAAAACTTACAAATGGAATGTGC 1630 0.4092 MAEKSCIKRLQKEYRALCKEPVSHVVACPSPSDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYKPPGISMITPNGRFMTQKKICLSMSDFHPESWNPMWCVSSILTGLLSFMMDTSPTTGSVNTTTAEKQRLAKSSLSFNCKNATFRKMFPEYVEKYNQQQLSEQAAPERVSSETSPDKSSRPVLEKKLETTGEEMRRVDGIKDVRKNRKPFPTWMMLLLFSIFGVVMALPLLQL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01449 238 Pfam Ubiquitin-conjugating enzyme 9 131 IPR000608 -
Pste6g01449 238 MobiDBLite consensus disorder prediction 167 195 - -
Pste6g01449 238 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
Pste6g01449 238 FunFam Ubiquitin-conjugating enzyme E2 34 1 177 - -
Pste6g01449 238 Gene3D Ubiquitin Conjugating Enzyme 1 178 IPR016135 -
Pste6g01449 238 SMART ubc_7 8 162 - -
Pste6g01449 238 CDD UBCc 7 157 IPR000608 -
Pste6g01449 238 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 7 158 - -
Pste6g01449 238 MobiDBLite consensus disorder prediction 167 182 - -
Pste6g01449 238 SUPERFAMILY UBC-like 5 157 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01449 Pste-Chr6 6302745 6307582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01449 1 238 Miscellaneous Gene Families AT1G17280 77.500 1.03e-133 374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01449 6 6302745 6307582 Pste6g01449 6 6302745 6307582 ECH