Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01445 atgggttccaaaactagctcctccgttgctcttttcctcactctcaacattctcttctttgcccttgtttctgctcgtgtgggctgccccccaccgccgccacgtcattccggtggttccagtgggtcaggtgcttcgtgccctcgcgatgcactcaaactaggtgtatgtgccaatgtgctaaatgggctggtgaacgtgactttgggtcaaccaccagttaccccatgctgctcactcctcaatggtctcgttgaccttgaggctgcagtgtgcctctgcacagccctcagagctaacattttgggtatcaatctcaaccttcccatttcactcaccttgcttctcaacgtttgctcaaggaatgtcccacgtggcttccaatgtgcctaa 393 0.0 MGSKTSSSVALFLTLNILFFALVSARVGCPPPPPRHSGGSSGSGASCPRDALKLGVCANVLNGLVNVTLGQPPVTPCCSLLNGLVDLEAAVCLCTALRANILGINLNLPISLTLLLNVCSRNVPRGFQCA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01445 130 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 49 129 IPR036312 -
Pste6g01445 130 CDD HPS_like 45 129 IPR027923 -
Pste6g01445 130 FunFam pEARLI1-like lipid transfer protein 1 45 130 - -
Pste6g01445 130 Pfam Hydrophobic seed protein 47 130 IPR027923 -
Pste6g01445 130 PANTHER - 6 129 - -
Pste6g01445 130 Gene3D - 45 130 IPR036312 -
Pste6g01445 130 SMART aai_6 47 129 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01445 Pste-Chr6 6292199 6292902 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01445 46 129 Acyl Lipid Metabolism Gene Families AT4G22490 44.048 4.43e-16 67.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01445 6 6292199 6292902 Pste6g01445 6 6292199 6292902 ECH