Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01442 atgagttcgaaaactagctcttcccttgcacttttcctcacactcaacctcctcttttttgcccttgtctcttcttgtgagacatgccctggcccaaagcctaagcataagcccatcaagccaagcccttcaggtgggtctggtggttcaggaggatccggcggttcaggtggatctggtggttcaggaggatccggcggttcaggtggatctggtggttctgcctcgtgccctcgtgatgcactcaaactaggtgtatgtgccaatgtactaaatgggttgttaaatgtgactttgggtcaaccaccagttaccccatgctgctcactcctcaatggtctcgttgatcttgaagctgcggtgtgcctctgcacagccctcagagctaacattttgggcatcaatctcaaccttcccatctctctcagcttgcttctcaatgtttgctcaagacaagtcccacgtgatttccaatgtgcctaa 483 0.0 MSSKTSSSLALFLTLNLLFFALVSSCETCPGPKPKHKPIKPSPSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSASCPRDALKLGVCANVLNGLLNVTLGQPPVTPCCSLLNGLVDLEAAVCLCTALRANILGINLNLPISLSLLLNVCSRQVPRDFQCA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01442 160 CDD HPS_like 75 159 IPR027923 -
Pste6g01442 160 Pfam Hydrophobic seed protein 77 160 IPR027923 -
Pste6g01442 160 Gene3D - 76 160 IPR036312 -
Pste6g01442 160 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 79 159 IPR036312 -
Pste6g01442 160 MobiDBLite consensus disorder prediction 46 72 - -
Pste6g01442 160 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Pste6g01442 160 FunFam pEARLI1-like lipid transfer protein 1 75 160 - -
Pste6g01442 160 MobiDBLite consensus disorder prediction 33 73 - -
Pste6g01442 160 PANTHER - 6 159 - -
Pste6g01442 160 SMART aai_6 77 159 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01442 Pste-Chr6 6275979 6276755 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01442 76 159 Acyl Lipid Metabolism Gene Families AT4G22490 42.857 6.52e-15 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01442 6 6275979 6276755 Pste6g01442 6 6275979 6276755 ECH