Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01407 GAGAAAGAGATGGAACAAAAAGCAAGATGGAAAAGTCATCACTCCATTTTCGAACGATCCTTCCTTTCCCGAATTCGTGTAATCTGATAGAATTCCAGACCAACAATTATTATTATTATATTTTCTTCCCCCCAATTTCAGATATAAATTATAGATTAATTTTTTTGTGGATAACGATGATGATCATCAAGATCCAAATTTGAAGTCGTTGATCATTCATTCTGCTACGGATCGTTTCTGGGTCGTTCTTTGTTTCCCTTAATATTTCCCTCCGCGTTTTCCTTCGTCGTTTCTCTCTCTGTTAACTACGTGTGCCAAATCTGTTTTGCAACCCTTTTCTCTTTACCCGAGGAGGATCTGATTGTGATTTTTATCAGAATTTGATGGGTCTGTCCGCTTGAATTTCCTGTTTGATCACTAGTGCTGTTTTGTTTGATTGGTTAAAGAATTTTGGTTTTGCAATGGGAGTGGCTTGACCTTTTGAGTTGCAGTTTTCGCATGAAGGGTTCTGTTTAATTGCATGTGATTAAGAAGAAAGGTATTCATCCTGGTATGAGCTTTTTGGTCTCCTTTGAATTTGGTGAATATTTTCGTGCTTCTGCAATTTGACTTGGGTTGTTTGTCATATGCTGTGAACTTATGCTATAGTCCTTGTTTAGTAGTGAAGAGTGATTTGTGAGAGTTGAATTGGTTGAAAGGTCGGAGAAGTGGGGTTCCTTTTATGAATTTTGAATTCACGTGTCAATAGAGGTGGCAATTGATATTTTTTCCATTTGTGAATTCGTTGATGAAGTTGTTTCCTAGGCTCAATGGTGAACCACAAACCCCCTCGACAAGGGTGGGGATTGTTTGTGGATATAGAAGATTTGAAATTCAGATTGTAAGTATAGTTGCTTAGGATATCTGGGATTGAATATATTTCTTTTGGGGTTCTAGTTCTTTATTTTGGATTAGTTCCCTATTTCTGAACATGGTTTGTTAGGAGTGGCAAATGGAAAAGTCATAATGAACGAGCAAACTAGATTGTGTGTCAATGGATGTAGTGGACAAGACTTTTTCTGAGCTTGTCAGCATCGTCAAATCATGGATTCCCTGGCGATCTGAGCCAGCAAATGTGTCTAGGGATTTTTGGATGCCTGACCAGAGTTGTAGAGTATGCTACGAGTGTGATTCCCAATTCACCTTATTTAACCGCAAACACCATTGCCGTCTCTGTGGACGAATTTTCTGTAACAAGTGTACAACAAACTCAGTTCCTGCCCCATTTAGCAACCAAAGGAATTCTTGGGATGAGTTGGAAAAGATTCGTGTGTGTAATTATTGTTACAAGCAATGGGAGCAGGGCATAGTAGCTTTTGAAAACGGTATTCCAGTTTCCAATCTGGATAGTAGTGCTTCAGAATCAACTTCAAGCTTGGCTAGCAGTAAAAGCAGTGCCACTGCAAACAGTAGTAATATTACGCTTTGCTCCATGCCTTTTTCAGTTGGATCTTATCAACAAATGCAACAGGGTTCTATTCTGAACCTGCGTAAATCACCCCTGAAGGGAAAGGACTCGGATACTGATAGGGAAGGTTTATCAGCATTAGCAGGGAGGAGTGATCTTGTAGCAGACACAGGTGATCCATTACCAAAGCAATATGGATTCTCAATAAACAGGAGTGATGATGATGAGGATGAGTATGGTGTATATCGGTCAGATTCTGATATGAGGCATTACCCTCAAGTAAATAGCTACTATGGACAAGCTAAGCTTGACGGGCTAGGCACCATTGATGTCCCGCAGAAGCTGGATCCTGTTGGGGAAAACATTAACACAAAACTCCCTTCAAACTACAGTTTTGACACTCAGGGTTTGGAAGAATCCTCAGTTATTGCCAAAAATGAGGATGAACCTGATATCTGTGATGAAAATGAGGCTCCTTCATCAATATATGTTTCAGAGGATGTTGATGCTGAACCTGTTGATTTTGAAAACAATGGACTTCTCTGGCTCCCTCCTGAACCAGAAGATGAAGAGGATGAACATGAAGCTATTTTGTTTGATGATGATGATGATGATAATGATGGGAATGCCATTGGAGAGTGGGGGTATCTGCGCAGTTCAAGCAGTTTTGGAAGTGGTGAGTATCGACACAGAGATAGATCAAGCGAGGAGCACAAGAAGGTAATGAAGAATGTAGTTGATGGACATTTTAGAGCATTGGTATCTCAGCTATTACAGGTTGAGAACCTACCAATTGAAGAGAATGACCAAAACAGTTGGTTGGAGATTGTCACATCTCTGTCATGGGAAGCTGCTACTTTATTGAAACCAGATATGAGCAAAAGTGGAGGGATGGACCCAGCTGGTTATGTGAAAGTCAAATGCATAGCATGTGGGAGCCGCATGGAAAGTGTGGTGGTTAAAGGAGTTGTGTGTAAGAAAAATGTGGCTCACCGGCGAATGACATCAAAAGTGGATAAACCTCGCTTATTGATCCTTGGAGGGGCTCTAGAGTATCAACGTGTTACCAACCTCTTATCTAGTGTAGATACCCTATTGCAGCAGGAAATGGACCATCTGAAGATGGCAGTGGCAAAGATAGCTTCGCATCAGCCAAACATCTTGTTGGTGGAGAAATCAGTCTCACGATATGCACAGGAATATCTTCTTGCAAAAGACATATCTCTGGTTCTCAATGTCAAGAGACCACTTTTGGAGCGTGTAGCACGCTGCACAGGCACTCAAATAGTCCCTTCAATTGATCATCTTTCATCACAAAAGTTGGGTTACTGTGAAGCATTTCATGTTGAAAAGTTTCTTGAAGACCTAAATAGTGCTGGTCAGGGTGGGAAAAAAACACCGAAAACATTGATGTTTTTTGAAGGTTGCCCAAAACCATTGGGTTTCACAATTTTACTTAGAGGTGCTGACAAGGATGAATTGAAGAAGGTAAAGCATGTAGTTCAGTATGGACTTTTTGCAGCTTACCATTTGGCTTTGGAGACATCTTTTCTTGCTGATGAAGGAGTCTCCCTCCCAGAAATTCCATTGAACAGTCTGTCCCTTCCAGATAAATCATCATCCATGCAGAGGTCCATTTCAACAGTTCCTGGTTTTGGTGTTGTTGACAATGAAAAGCCTCAAGTACATGAAACTGAACCACGTAGAACCAGAAGTGTCTCAGCTGCTGATCTAGTCTCATCAACCGGCAGTGCAGTGCCATGTGTGTCTAATGATGCCTCTCAATCTTTGCCACTTGGATCAAGTCTCGACCATTCAACTGCCTTTTACTCCTCCATTGTTGCTTCAGGAAATTCAATTCCAGAATCACACCATAATACGCTTCTTCCATGCAGTAGTAGAGACACAAATGAAATGGACTCCAAACTACCTTTAGTGGAAGAAACTTCTATAGCGGACAACTCTCTGGTTGTCATGGATGATCCTGGAACTTCAGAGAAACTATATCAAATGTCCTCTGACATTCCACAAAATGGTGATAGCCAAATCTCTAAAAACCAATTTAGCGGATCTGGATCTTTATCTCCAAAAGATGTTCAAAACCATCCTGAGAATCTTGATATCTCAAATGAAGAGCCAGTTCTCTTAAAAGAAGAGTTTCCTCCATCTCCCTCTGACCATCAAAGCATTTTGGTGTCTTTGTCATCTCGATGCATATGGAAGGGAACTGTATGTGAGAGGTCCCATCTCTTTCGAATTAAATACTATGGCAGCTTTGATAAACCATTGGGTCGATTTCTGCGGGACCATTTATTTGATGAGAGTTATCGATGCCATTCTTGTGAAATGCCATCAGAAGCACATGTGCATTGCTATACTCATAGACAGGGAACACTTACCATATCCGTCAAGAAACTACCGGAAATTATCCTACCTGGTGAAAGGGATGGAAAGATTTGGATGTGGCATAGGTGCTTGCGGTGTCCAAGAATCAATGGCTTTCCTCCTGCTACACAGAGAATAGTAATGTCTGATGCTGCTTGGGGTTTGTCATTTGGGAAATTTTTGGAGCTCAGTTTCTCAAACCACGCTGCAGCCAGCAGGGTGGCAAGCTGTGGCCATTCTTTACATAGAGATTGTCTTCGTTTTTATGGATTTGGACAAATGGTTGCTTGTTTTCGATATGCATCAATTGATGTTCACTCAGTCTACCTTCCCCCCCACACACTTATATTTGATTATGGAATTCAGGATTGGATACAACAAGAATCAGATGAGGTGGTCAATCGGGCAGAGCTTTTATTCTCTGAGGTACTCAATGGTCTTAGTCAAATTGGAGAGAAAAGATCTAATGCAGTCCAAGTCAATAATGGACATAAAACACCTGAATTAAGACGCCAAGTTGCTGAACTAGAGGGGATGTTGCAAAAGGAGAAAGTAGAATTTGAGGAAACTCTTCAAAAGATTTTGAACCAAGAAAAGAGAAATGGCCAACCTGGGGTTGACATTCTTGAAATTAATCGATTGTGGAGGCAATTACTTTTTCAATCATATATGTGGGATCACCGCCTTATTTATGCAGCCAACTTAGTCAATTCCAACAATGAATCTGGTTCAAGCAGTCCAATTTCAGAGGATAAGGAGAAACCTACTGATGAAAATCAGATGAGCATTAACTCTATTCATGGTGATCCAAATCTTAGTGAAAGCCCTAGCGTTGGAGGAGGAAGTGTAGTAGTAGTTGATGGCAAAATTTCGCAAGATGAAATTGACTTGGCCAAAAGTAAAAATCATGACAAAGATGACGTACCTAATCTTCCAAACAGCAAAAGCATTAATGATCAATCAAATCTTTTAGAACCAGAATTGGGTGTTCGCAGGGCTCTCTCTGACGGGCCATATCCTGTCATACCTAGTTTGTCTGAAACACTTGATGCAAAATGGACTGGTGAAAACCACTCAGGATTTGGAATTCAGAAGGATAACAGTTCTACAAATCCTGATATACTTCCGGCAGATGCTTTGACAACTAATGTACAAAAAGAAACATATTATCTAGGGGATCGTGCAGAAGATCAAAATGGGTCCAGGAGTTTCTATGCTTCTTTTAAAGGTCAGGATAATATGGAAGACTCTTCAAGCTGGTTAGGAATGCCCTTCTTGAACTTCTATCGCCAATTTAATAAGAACCTTTTTGCCAGTACACAGAAGTTTGATACCCTAGTTGATTACAATCCAGTTTATGTCTCATCTTTCCGGAAGCAGGAACTCCAGGGTGGAGCAAGGCTGCTTCTGCCGATTGGTGTCAATGACACTGTAATTCCAGTATATGATGATGAACCCTCAAGTATTATAGCTTATGCCTTAATGTCACCTGAACATCATTTCCAATTGACTGAAGAAGGAGAAAGACCAAGAGAAGGAAATGAGTTTGCTTCATCATATTTTTCGGACTCAGGCACCTTGCAGTCATTCTCATCTGTTGATGAAACAGCTTTTGATTCACAGAAAAGTTTTGGATCAATAGAGGAAATGGTATTTTCCATGTCTGGATCTCGTAATTCATCAGTGTTGGACCCAATGTTGTACACTAAGGCTATGCATGCCAGAGTTTCCTTTGGAGAAGATGGTCCCCTTGGCAAGGTAAAATATTCTGTGACTTGTTACTATGCCAAGCGATTTGAAGCTTTAAGAAGGGTCTGTTGCCCTTCAGAGCTCGACTATATAAGATCTCTGAGTCGCTGTAAGAAATGGGGAGCTCAAGGTGGGAAGAGTAATGTATTCTTTGCAAAAACTTTGGACGATCGATTTATCATCAAACAAGTTACTAAAACAGAACTTGAATCATTCTTTAAATTTGGTCCTGAATACTTCAAGTACCTTTCGGAATCCATAGCCACCGGAAGTCCAACATGCCTGGCAAAGATTCTTGGCATATACCAGGTTACATCAAAGCATCTTAAAGGAGGTAAAGAATCAAGGATGGATGTTTTGGTTATGGAGAACCTTCTGTTTAGGAGGACTGTGACACGACTTTATGATCTCAAAGGATCTTCTAGGTCTCGGTATAATGCAGATAGTACTGGGAAAAACAAAGTTCTTCTGGACCAGAATTTAATTGAAGCAATGCCAACTTCTCCTATTTTCGTGGGAAACAAAGCAAAACGATTGTTAGAGAGAGCTGTCTGGAATGACACTGGTTTTCTTGCTTCAGTTGATGTAATGGATTATTCTTTACTGGTTGGTGTGGATGAAGAGAAGCATGAGTTGGTTATTGGAATCATTGATTTCATGAGGCAGTATACCTGGGACAAGCATCTTGAAACATGGGTAAAAGCTTCAGGCATCCTTGGAGGACCAAAGAACACACCTCCAACAGTTATATCACCCAAGCAATACAAGAAAAGGTTCAGGAAAGCAATGACCACTTACTTTCTCATGCTTCCTGATCAGTGGTCTCCCCCTTCTCTTATTCCTAGTAATTCTCAGTCTGATTTAGGTGAAGAAAACACACAATCTAGGACTCCAGGTGAATGATTCTTTGTTTTGTGTTTTTGTAAATTTTGCTTTCAATTTGGGGAATTAATTGCCCCATAATTTTTATTTTTTTTTTGTTTTTCCCTCTTAAATTATATAGGAATTCTTTTGGTTCATTTGTAATTTTGCCAACTAGATATTATCCATTGTTTGTTAGAAGATACCAAAAGGGCTGTTGGCAGCCAAGGATGTTTGTCTGGGGTAAAAATATTTGATGACCTCTGGATGAAATCTTTGTACAAAACCTATAGTAACGTTCTAGCAATACGTTCTATACATGTATATGACTTAAATTTCCCATACGTGCTG 6793 0.4022 MDVVDKTFSELVSIVKSWIPWRSEPANVSRDFWMPDQSCRVCYECDSQFTLFNRKHHCRLCGRIFCNKCTTNSVPAPFSNQRNSWDELEKIRVCNYCYKQWEQGIVAFENGIPVSNLDSSASESTSSLASSKSSATANSSNITLCSMPFSVGSYQQMQQGSILNLRKSPLKGKDSDTDREGLSALAGRSDLVADTGDPLPKQYGFSINRSDDDEDEYGVYRSDSDMRHYPQVNSYYGQAKLDGLGTIDVPQKLDPVGENINTKLPSNYSFDTQGLEESSVIAKNEDEPDICDENEAPSSIYVSEDVDAEPVDFENNGLLWLPPEPEDEEDEHEAILFDDDDDDNDGNAIGEWGYLRSSSSFGSGEYRHRDRSSEEHKKVMKNVVDGHFRALVSQLLQVENLPIEENDQNSWLEIVTSLSWEAATLLKPDMSKSGGMDPAGYVKVKCIACGSRMESVVVKGVVCKKNVAHRRMTSKVDKPRLLILGGALEYQRVTNLLSSVDTLLQQEMDHLKMAVAKIASHQPNILLVEKSVSRYAQEYLLAKDISLVLNVKRPLLERVARCTGTQIVPSIDHLSSQKLGYCEAFHVEKFLEDLNSAGQGGKKTPKTLMFFEGCPKPLGFTILLRGADKDELKKVKHVVQYGLFAAYHLALETSFLADEGVSLPEIPLNSLSLPDKSSSMQRSISTVPGFGVVDNEKPQVHETEPRRTRSVSAADLVSSTGSAVPCVSNDASQSLPLGSSLDHSTAFYSSIVASGNSIPESHHNTLLPCSSRDTNEMDSKLPLVEETSIADNSLVVMDDPGTSEKLYQMSSDIPQNGDSQISKNQFSGSGSLSPKDVQNHPENLDISNEEPVLLKEEFPPSPSDHQSILVSLSSRCIWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHLFDESYRCHSCEMPSEAHVHCYTHRQGTLTISVKKLPEIILPGERDGKIWMWHRCLRCPRINGFPPATQRIVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGQMVACFRYASIDVHSVYLPPHTLIFDYGIQDWIQQESDEVVNRAELLFSEVLNGLSQIGEKRSNAVQVNNGHKTPELRRQVAELEGMLQKEKVEFEETLQKILNQEKRNGQPGVDILEINRLWRQLLFQSYMWDHRLIYAANLVNSNNESGSSSPISEDKEKPTDENQMSINSIHGDPNLSESPSVGGGSVVVVDGKISQDEIDLAKSKNHDKDDVPNLPNSKSINDQSNLLEPELGVRRALSDGPYPVIPSLSETLDAKWTGENHSGFGIQKDNSSTNPDILPADALTTNVQKETYYLGDRAEDQNGSRSFYASFKGQDNMEDSSSWLGMPFLNFYRQFNKNLFASTQKFDTLVDYNPVYVSSFRKQELQGGARLLLPIGVNDTVIPVYDDEPSSIIAYALMSPEHHFQLTEEGERPREGNEFASSYFSDSGTLQSFSSVDETAFDSQKSFGSIEEMVFSMSGSRNSSVLDPMLYTKAMHARVSFGEDGPLGKVKYSVTCYYAKRFEALRRVCCPSELDYIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFFKFGPEYFKYLSESIATGSPTCLAKILGIYQVTSKHLKGGKESRMDVLVMENLLFRRTVTRLYDLKGSSRSRYNADSTGKNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTGFLASVDVMDYSLLVGVDEEKHELVIGIIDFMRQYTWDKHLETWVKASGILGGPKNTPPTVISPKQYKKRFRKAMTTYFLMLPDQWSPPSLIPSNSQSDLGEENTQSRTPGE 1816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01407 1816 Coils Coil 1106 1133 - -
Pste6g01407 1816 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1459 1783 IPR002498 GO:0016307|GO:0046488
Pste6g01407 1816 MobiDBLite consensus disorder prediction 1172 1216 - -
Pste6g01407 1816 SUPERFAMILY FYVE/PHD zinc finger 31 102 IPR011011 -
Pste6g01407 1816 Gene3D GroEL 453 626 IPR027409 -
Pste6g01407 1816 MobiDBLite consensus disorder prediction 805 843 - -
Pste6g01407 1816 Pfam TCP-1/cpn60 chaperonin family 398 649 IPR002423 GO:0005524
Pste6g01407 1816 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1459 1640 IPR027484 -
Pste6g01407 1816 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Pste6g01407 1816 MobiDBLite consensus disorder prediction 1793 1816 - -
Pste6g01407 1816 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 24 109 - -
Pste6g01407 1816 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 22 1797 - -
Pste6g01407 1816 Gene3D - 1642 1784 - -
Pste6g01407 1816 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 1484 1640 - -
Pste6g01407 1816 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1642 1784 - -
Pste6g01407 1816 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 107 IPR013083 -
Pste6g01407 1816 SMART PIPK_2 1493 1784 IPR002498 GO:0016307|GO:0046488
Pste6g01407 1816 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 453 626 - -
Pste6g01407 1816 Pfam FYVE zinc finger 33 101 IPR000306 GO:0046872
Pste6g01407 1816 MobiDBLite consensus disorder prediction 1192 1211 - -
Pste6g01407 1816 MobiDBLite consensus disorder prediction 1231 1253 - -
Pste6g01407 1816 CDD Fab1_TCP 389 660 - -
Pste6g01407 1816 SUPERFAMILY SAICAR synthase-like 1515 1783 - -
Pste6g01407 1816 CDD FYVE_PIKfyve_Fab1 32 99 - -
Pste6g01407 1816 SMART fyve_4 28 103 IPR000306 GO:0046872
Pste6g01407 1816 SUPERFAMILY GroEL apical domain-like 454 626 IPR027409 -
Pste6g01407 1816 CDD PIPKc_PIKfyve 1520 1783 IPR044769 GO:0000285
Pste6g01407 1816 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1559 1725 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01407 Pste-Chr6 6100939 6111584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01407 2 1816 EF-hand Containing Proteins AT3G14270 60.714 0.0 2104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01407 6 6100939 6111584 Pste6g01407 6 6100939 6111584 ECH