Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01391 GGACACAAGAAGTACATCAAATTAAGACAGGGCCTAGGAGAAAGGGTTGAGAGGATACAGAGAGAGTGAGAAAAATGGATTTTCATTGGGTTAAGTTAATTCTTCTCATGGCTGGCATTCTTCCTGCTTTGGTAGAATGCAGAGTTAGGCACTACAAATTTCATGTTGTGTCTAAACCAACCAGTAGATTGTGTTCAAGCAAATCTATTCTCACCATTAATGGGAAGTTCCCTGGACCCACTCTCTATGCCAGGGAAGATGACACAGTGCATGGTGTGAGGCAATTGAGAACTGGTTGGGCTGATGGGCCTGCATATGTCACACAGTGCCCAATTCAACCAGGGCAAAGCTATTTGTACAACTTCACCCTCACTGGACAAAGAGGAACACTTCTTTATCATGCACATGTTAACTGGCTAAGGTCAACTCTCCATGGTGGCATAGTTATCTTGCCAAAGAGAGGTGTGCCTTATCCTTTCCCAAAGCCAGATGATGAATTGGTTGTGGTATTAGGAGAATGGTGGAAATCTGATACAGAAGCTGTTATCAATGAAGCACTCAAATCAGGAACAGCACCAAATGTATCAGATGCTCATACCATTAATGGCCTTCCAGGGACAGTGACCAATTGTTCTACACAGGATGTTTACAACCTGCCTGTAGATAGTGGAAAGACCTACCTGCTGAGAATTATCAATGCTGCACTCAATGAAGAACTTTTCTTCAAAATTGCTGGCCACAAACTCACAGTGGTAGAAGTTGATGCCACATATGTAAAGCCTTTCAAAACTGAAACAATTGTGATAGCCCCTGGCCAAACCACCAATGTTCTTCTAAATGCAGACCAAAAATCTGGCAAGTACTTGGTAGCTGCCTCTCCTTTCATGGATGCTCCTGTTGCAGTGGACAACTTAACTGCCACAGCAACATTGCACTACACAGGCACTCTTGCCTCTACCACCACAATTCTCACCACCCCACCACCCCAAAATGCTACCCAAGTTGCTAACAACTTCATCAACTCTCTTAGAGGCCTTAACTCCAAAAAATACCCTGTCAATGTCCCATTAACAGTTGATCATTCACTTTTCTTCACTGTTGGGTTGGGGATCAACCCTTGTCCCTCTTGCAAAGCTTTAAATGGGAGCAGGGTGGTGGCTTCCATCAACAATGTGACATTTGTTATGCCAACCATTGCCTTACTTCAAGCACACTATTACAACATCAAAGGGGTATTCACCACTGATTTCCCTGCCAAACCAGCCCATGTCTTCAACTACTCAGGGCCTGGACCAGCCAATTTGAACACAATGACTGGCACAAAGGTTTACAGGCTACCATTCAATGCCACAGTTCAGCTTGTTCTGCAAGATACTGGAATCATTGCACCTGAGAACCATCCAGTTCATCTTCATGGATTCAATTTCTTTGTTGTTGGAAGCGGAGTAGGTAATTACAATCCCAATACTGATCCAAAGAACTTTAACCTTGTTGATCCTGTTGAAAGGAACACAATTGGAGTACCAGGTGGAGGGTGGACTGCAATTAGATTCAGAGCAGATAATCCAGGAGTTTGGTTCATGCACTGCCACTTGGAGATACACACAACATGGGGACTAAAGATGGCATTTTTAGTGGACAATGGCAAAGGCCCTAAGCAATCAGTGATACCCCCACCAAAAGATCTTCCCAAATGCTAATATGCCAATCATCAATTAATTATGGAACTTACAAAGGAAAGGCCTTCCAATGCAGAAAACAAAAAAACTTTGGGAGAAGCCAGGCAAAAGAAGAGAGAGTGCAAACAAAAGGGTTATTTAATAAGCGAGTATCCCGAATGTTTTTTCTTTGAGCAAATAGGTGAATTTGTTCAAGCAAATTTAATAAATTGAGCGAGCATTTTGGTTTTCCTCTAGCAAATTCAATTTTTTAAGGCACTGTGTATGTATTGGAAATTTGGAACCAATAATTGTACGCTCTTGTTTGTTTCATTAAATACAAAAAGGTTGTTTTCTTCGTTC 2021 0.4216 MDFHWVKLILLMAGILPALVECRVRHYKFHVVSKPTSRLCSSKSILTINGKFPGPTLYAREDDTVHGVRQLRTGWADGPAYVTQCPIQPGQSYLYNFTLTGQRGTLLYHAHVNWLRSTLHGGIVILPKRGVPYPFPKPDDELVVVLGEWWKSDTEAVINEALKSGTAPNVSDAHTINGLPGTVTNCSTQDVYNLPVDSGKTYLLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKTETIVIAPGQTTNVLLNADQKSGKYLVAASPFMDAPVAVDNLTATATLHYTGTLASTTTILTTPPPQNATQVANNFINSLRGLNSKKYPVNVPLTVDHSLFFTVGLGINPCPSCKALNGSRVVASINNVTFVMPTIALLQAHYYNIKGVFTTDFPAKPAHVFNYSGPGPANLNTMTGTKVYRLPFNATVQLVLQDTGIIAPENHPVHLHGFNFFVVGSGVGNYNPNTDPKNFNLVDPVERNTIGVPGGGWTAIRFRADNPGVWFMHCHLEIHTTWGLKMAFLVDNGKGPKQSVIPPPKDLPKC 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01391 541 SUPERFAMILY Cupredoxins 17 151 IPR008972 -
Pste6g01391 541 Gene3D - 66 129 IPR008972 -
Pste6g01391 541 Gene3D - 17 65 IPR008972 -
Pste6g01391 541 CDD CuRO_2_LCC_plant 143 288 IPR034285 -
Pste6g01391 541 PANTHER MULTI-COPPER OXIDASE 31 529 IPR045087 -
Pste6g01391 541 CDD CuRO_3_LCC_plant 387 524 IPR034289 GO:0005507
Pste6g01391 541 Pfam Multicopper oxidase 65 128 IPR011707 GO:0005507
Pste6g01391 541 SUPERFAMILY Cupredoxins 135 308 IPR008972 -
Pste6g01391 541 Pfam Multicopper oxidase 141 290 IPR001117 -
Pste6g01391 541 FunFam Laccase 139 324 - -
Pste6g01391 541 SUPERFAMILY Cupredoxins 331 541 IPR008972 -
Pste6g01391 541 Gene3D - 350 541 IPR008972 -
Pste6g01391 541 Pfam Multicopper oxidase 409 524 IPR011706 GO:0005507|GO:0016491
Pste6g01391 541 NCBIfam laccase 22 541 IPR017761 GO:0046274|GO:0048046|GO:0052716
Pste6g01391 541 Gene3D - 138 323 IPR008972 -
Pste6g01391 541 ProSitePatterns Multicopper oxidases signature 1. 499 519 IPR033138 -
Pste6g01391 541 ProSitePatterns Multicopper oxidases signature 2. 504 515 IPR002355 GO:0005507
Pste6g01391 541 CDD CuRO_1_LCC_plant 27 127 IPR034288 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01391 Pste-Chr6 6030140 6035454 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02181 5 14352651 14372738 Pste6g01391 6 6030140 6035454 PCT