Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01305 GTGAAGTTGACGCGACTTGAATCCGTGAGGCGCAACGTAAACGAGTGGAAGACGAAGGGTTTTTAACCAAACTTTAATCATTTGCTTCCCGCGCTGAAAAACCAGTGAGTGAGGGTTTTAAGCTCACTCGAAAGTCAAAGCCCCAATTCTCAATGGAAGACGAAATGACAATGAACACTTCTCCCAATTACGACAGTTACTTCGACCCTCACAACCTCACTTCGCGACAGCAGTTCCGCAGATACGGGAAGAGGCACTCAACTTCAGGTGCTTCTATACAACAAGACAACTCAGCTTCCAAGTTAAGTGAAACTGGATTGTTATATGATGGACAAAGCATCCATAGTCCTACTAATGCAGCACTCGTTCTTGAAAATATTAAACAAGAGGTTGAGAGTCTTGATGCTGATTACATGGAAGAGAAGACACCATATTCCACTAGAAGGAGGTTGTCTGCTGATATTAATGGAGTCCCTGGTGTAGATGCCAGTTTTGACTCCATACGCTACTCATTAAAGGCTTGTAAGACAGAGGGTGATTCATTGGGAGATGGTGCAGAAACAATCTTTACTTTATTTGCATCTCTGCTTGATTCTTCTTTGCAAGGATTGATGCCTATTGCTGATCTGATACTAAGGATCGAGAATGCATTTACAAATATGAGGGGAGAATCAGTTAACCTGTATGGTTTGAATATAAGGCATCGAGTTGTTGAGGACAAATTGATGAGACAGAAGGCTCAACTTTTGCTTGATGAAGCGGCAACGTGGTCTCTCTTGTGGTTCCTATATGGGAAAGGAAATATATCCCTAACCATATATTTTTTGACTGAAGAATTATCTAAAGATCTAACACTGGTGTCAGGAACATCTCATGTGGTGGCTTGTGAGTTTGTTTCAGAGGACCATACAGCTCAATTATGCCTTCGGATAGTCCAATGGTTAGAAGGTTTAGCCTCTAAAGCACTTGACTTGGAAGCAAAGGTACGGGGATCTCATGTTGGTAGTTATATCCCGAGCTGTGGAGTTTGGCATCATACTCAGCGTTATCTAAAGAAAGGAGCTCTTGACATGAATATTGTGCATCACTTGGACTTCGATGCTACAACCCGTGAAAGTGCAAATCTTTTGCCTGATGACAAGGGCTGGAAGGCTAGAAGAGGCTTGTGGACTTTGCCGTTCTGCTGGACAGGTGACCAGAACTTTGACCATGATATGTTTATGGATTTTATGCTTCCCATATTAACGTTATTTGGGCAGCCTTGGAGAGCTTCGTCTCTTTGTCCATTTGGAGGCTTGAATCAGTTTCCTTCTGTTGAGGCTCTGGTGAAGAATGGTAAAAATAGAACTCTGCAAGCTGTTGAATTTGAAAGTGGCATTGGTCATCAGTGGCATCTCTGGAAATGGGCTTCATATTGTGCATCAGAGAAAATAGCAGAGCATGGTGGGAAATGTGAAGCAGCTATATATGCGGCTCAGTGTAGCAACCTAAAGCGGATGCTTCCACTATGCAATGACTGGGAGTCAGCATGCTGGGCAATGGCAAAGTCTTGGCTAGATGTGCAGGTGGACTTGGAAATCACCAGATCTCTGCCAGGGGGAGTTGAGCAACTTAGAACTTTTGGAGATGTAATTGATGGAAGCCCTGGACACACTGATGGTTCTTTTGAGCCTTCTAATGGACCTGAAAATTGGCCAATTCAAGTTTTGAATCAGCAACCTAGACAACTCTCATCCCTTCTTCAAAAACTGCATTCAGGGGAAATGATCCATGAAGCTGTTACCCGACAATGCAAGGAGCAACAGCGACAAATTCAGATGACTTTGATGCTAGGGGACATACCACGTGTACTAGACCTTATATGGTCATGGATAGCACCTACCGAAGATAATCAAAATGTATTTAGGCCTGGTGGAGATCCTCAAATGATACGCTTTGGTGCACATCTGGTCCTTGTGCTTAGATATTTACTTGTCGAAGAAATGAAGGACACCTTCAAGGACAAGATTCTGAGTGTTGGTGATAATATTTTGCACTTGTATGCCCTGTATCTCTTTTCAAAGGAGCATGAGGAGTTGGTTGGTATATATGCTTCTCAGCTTGCAGGTCACCGTTGCATTGATCTCTTTGTGCACATGATGGAACTTAGGCTATACAGCAGTGTACATGTCAAATACAAGATATTCCTTTCTGCTATGGAATATTTGCCATTTTCTTCTATGGATGATTCCAACGGAAATTTTGAAGACATTATTGAGAGAATTTTGTTAAGATCCCGAGAGATCAAGGTTGGCAAATATGATAACCTGTCAGATGTTGCAGAACAGCACAGATTGCAGAGTCTTCAAAAAGCTAAAGTCATTCAGTGGCTTTGCTTTACGCCACCATCAACAATTACTAATGTCAAAGATGTCAGTAAAAAGCTGCTTCTCCGAGCACTGGTCCATAGCAACATACTCTTTAGGGAGTTTGCTTTGATTTCTATGTGGAGAGTACCAGCAATGCCTATAGGTGCCCATACAGTACTTGGTTTTCTTGCTGAACCCTTAAAACAGCTTGCAGAAACTCTTGAGACCTCTGAGGATTATAATGTTTTTGAGAATATGAGGGAGTTCCAAGACTGGCGTGAGTATTACTCCTGTGATGCAACCTACCGCAATTGGCTAAAAATTGAAGTAGAGAATGCAGAGGTTCCTGTCTCTGAACTTTCACTAGAGGAAAAGGAAAGGTCCATTTCAGCTGCCAAGGAGACACTGAATGCGTCCCTTTCACTGCTACAAAGAAAAGAAACACCTTGGTTGGCTTTGACCGACCGTATGTATGAATCAGCTGAACCTGTTTTCCTTGAACTTCATGCAACGGCAATGCTCTGCCTGCCGTCTGGAGAGTGTTTGTGTCCAGATGCTACTGTTTGTACTACACTGACAAGTGCACTATATTCTTCAGCTGGCGATGAGGTTGTCTTAAATCGACAACTAATGGTTAATGTTTCCATATCTTCAAGGGACAGTTTCTGCATTGATGTTGTTCTTCGATGCTTAGCAATAGCTGGTGATGGACTTGAACCACATGATCTCAATGATGGTGGTATTCTTGGCACTATCATGGCTGCTGGTTTTAAAGGCGAGCTTCCTCGGTTTCAAGCTGGAGTTACAATGGAAATATCCTGTTTGGATGCTTGGTATTCTGACAAAGATGGTAACTTAGAGTGTCCTGCAACATACATCGTGAAAGGACTTTGTCGTAGGTGTTGTCTCCCAGAAGTCATTCTTCGCTGCATGCAAGTTTCTGTTTCTCTTATGGGATCGGGAGTGCTGCCTGACTGTCATGATACTTTGATAGAGCTGGTTGGCAGTTCTGAAACTGACTTTCTTCACTTGTTTAGTCAACAGCAATTACAGGCAAGAGTTTTTATTGTTAGAGAGGGAATACTCAATCTGCAAAATGGATATTACAGAGGAATGATTATTGCACCTGCAGCTGAAATTGATCTGGTGCTTCTTCTGGAACTACAAATTTTGGAAGGATTAAATGCCTCATAAACTAAACTTACATAGTATTTACTCTGCTTTTAGAAGAAAGAGCAAGGATGAAAGTGCCTGATTCCAATTGCACAAAGCAAGTCTAGTGCAAGGGTTACCGTTATTCTATCATAGCTTCGAGAATTGGGCATTCCCCAATTCCCAAAAATTAGTGAACAAAGTGTATTAGGAATTTTGTTTTTAATCTTGTTCTTGAAGTAAAAAAGTCCCTTTGTATATAATTTTGTATCAGAATATTTTATATATTCATGGCTCGCGTTTCCGCTATGCTTTGTTTTTGTCTTTTCTTTGCATTGTATACATTGAGCAAGCTTATAGTGCA 3864 0.4174 MEDEMTMNTSPNYDSYFDPHNLTSRQQFRRYGKRHSTSGASIQQDNSASKLSETGLLYDGQSIHSPTNAALVLENIKQEVESLDADYMEEKTPYSTRRRLSADINGVPGVDASFDSIRYSLKACKTEGDSLGDGAETIFTLFASLLDSSLQGLMPIADLILRIENAFTNMRGESVNLYGLNIRHRVVEDKLMRQKAQLLLDEAATWSLLWFLYGKGNISLTIYFLTEELSKDLTLVSGTSHVVACEFVSEDHTAQLCLRIVQWLEGLASKALDLEAKVRGSHVGSYIPSCGVWHHTQRYLKKGALDMNIVHHLDFDATTRESANLLPDDKGWKARRGLWTLPFCWTGDQNFDHDMFMDFMLPILTLFGQPWRASSLCPFGGLNQFPSVEALVKNGKNRTLQAVEFESGIGHQWHLWKWASYCASEKIAEHGGKCEAAIYAAQCSNLKRMLPLCNDWESACWAMAKSWLDVQVDLEITRSLPGGVEQLRTFGDVIDGSPGHTDGSFEPSNGPENWPIQVLNQQPRQLSSLLQKLHSGEMIHEAVTRQCKEQQRQIQMTLMLGDIPRVLDLIWSWIAPTEDNQNVFRPGGDPQMIRFGAHLVLVLRYLLVEEMKDTFKDKILSVGDNILHLYALYLFSKEHEELVGIYASQLAGHRCIDLFVHMMELRLYSSVHVKYKIFLSAMEYLPFSSMDDSNGNFEDIIERILLRSREIKVGKYDNLSDVAEQHRLQSLQKAKVIQWLCFTPPSTITNVKDVSKKLLLRALVHSNILFREFALISMWRVPAMPIGAHTVLGFLAEPLKQLAETLETSEDYNVFENMREFQDWREYYSCDATYRNWLKIEVENAEVPVSELSLEEKERSISAAKETLNASLSLLQRKETPWLALTDRMYESAEPVFLELHATAMLCLPSGECLCPDATVCTTLTSALYSSAGDEVVLNRQLMVNVSISSRDSFCIDVVLRCLAIAGDGLEPHDLNDGGILGTIMAAGFKGELPRFQAGVTMEISCLDAWYSDKDGNLECPATYIVKGLCRRCCLPEVILRCMQVSVSLMGSGVLPDCHDTLIELVGSSETDFLHLFSQQQLQARVFIVREGILNLQNGYYRGMIIAPAAEIDLVLLLELQILEGLNAS 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01305 1129 Pfam Nuclear pore protein 84 / 107 199 886 IPR007252 GO:0005643|GO:0017056
Pste6g01305 1129 PANTHER NUP107-RELATED 21 1093 IPR007252 GO:0005643|GO:0017056
Pste6g01305 1129 Gene3D - 293 450 - -
Pste6g01305 1129 MobiDBLite consensus disorder prediction 1 20 - -
Pste6g01305 1129 Gene3D - 722 912 - -
Pste6g01305 1129 FunFam Nuclear pore complex protein 721 889 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01305 6 5629087 5658229 Pste6g01305 6 5629087 5658229 ECH