Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01242 AAATCATAGCCAGCTAATTCCATTTCAACCGACACGGCACTACCCTTCTCAGTTCTCACACAAATCTCTTCACATTCATCCATAGACAACAGAATCACCCTCTAAAGACCAAAAGAAATCATGGGTTCTTCATTGCTAGAGAGGTCTTTCTTTGTTCCTTCTTCTCCTTCATCACTTCTCAACCAAACTCGCTTCCTACTTCCTTTGGAGAACAAAAGATTTGTGAGGGTCAAGAAAGCTGGAAAGTTTCCTGTGGCTGCCATAAGTGAGGATTTGATGAAGGGTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCCTCTTCCTCTTCTTCTGTGTCCACAGAAAAACCAGTGAAGTTCAAGGTTAGAGCAGTGATCACAGTGAGGAACAAGATCAAAGAGGATTTCAAAGAGACCATTGTGAAGCATATTGATGCTATAACTGACAGGATTGGAAGGAATGTTGTCCTTGAACTTGTTAGTACTGATATTGATCCAAAGACCAAAGCTGCAAAGAAGAGTAGTGAAGCGGTGCTGAAGGATTGGTCAAAAAAGTCCAATCTTAAGGCAGAGAGAGTTAATTACACAGCTGAATTCATAGTTGACTCTAATTTTGGGGAGCCAGGTGCTATTACTATAACAAACAAACACCAGAAAGAGTTCTTCTTGGAAAGCATAACCATTGAAGGATTTGCAAGTGGACCAGTTCATTTCCCCTGCAATTCTTGGGTACAAGCAAGAAAAGATCATCCTGCAAGGAGGATTTTCTTTTCCAACAAGCCATATTTACCCGGGGATACACCTGCTGGGCTTAGATTGTTGAGGGAGAAAGAGCTGAGAAATCTCAGAGGTGATGGCAAAGGAGTTAGAAACTTATCTGACAGAATATATGACTATGATATATATAATGATTTGGGAAATCCAGATAAAGGAAATGAACTTGCTAGACCAAATCTTGGAGGATCAGATATGTATCCATACCCCAGACGGTGTCGTACTGGCCGTGAACCAAGTGATACAGATATGTACGCAGAGAGTCGTGTGGAGAAGCCACTTCCTATGTATGTGCCTAGAGATGAACGTTTTGAGGAGTCTAAGCAGAACACATTCTCTGTGAAGAGGCTCAAGGCAGTGCTGCATAACTTGATTCCAGGTCTTAAGGCTAGCCTTTCTGCTAGCAACCAAGACTTCAATGAATTCTCAGATGTTGATGGCCTTTACAGCGAAGGGCTTCTCATAAAGTTGGGGTTGCAAGATGACATGTTGAAGAAGATTCCATTTGTTAGCAAGATCCAAGAATCCAGCCAGGGACTTCTTAAGTATGATACTCCTAAGATTATTTCCAAGGACAAGTTTGCTTGGCTGCGAGATGACGAATTTGCCCGCCAAGCAATAGCAGGAGTTAACCCTGTTAACATTGAGAGGCTTAAAGTTTTCCCACCAGTTAGCAAACTAGACCCCGAAATTTATGGCCCCCAAGAGTCTGCTCTTAAAGAAGAACATATTTTGAATCAACTTAATGGCATGACTGTCCAAGAGGCAATTAACGAAAATAAGCTGTTTATCATTGATTATCATGATATTTACCTTCCTTTCCTAGAAGGGATCAATGCCCTTGATGGTAGGAAATCATATGGCACACGCACCATATTTTTCTTGACACCACGTGGCACTCTGAAGCCTGTGGCTATAGAACTTAGCCTCCCTCATGCTGGACCTAGTTGTAGATCAAAGCGCGTGGTTACACCTCCTGTCGATGCAACTACTAATTGGATGTGGCAGCTTGCCAAAGCCCATGTTTGCTCCAATGATGCTGGGGTACACCAACTTGTTAACCATTGGTTACGGACACATGCCAACTTGGAACCATTTATATTGGCAGCTCATAGGCAATTGAGTGCTATGCATCCAATTTACAAGTTATTGGACCCTCACATGAGGTACACCTTGGAAATCAATGCCTTAGCTCGACAGAGCTTGATCAATGCTGATGGAATCATTGAAAATTGCTTCACTCCTGGTCGCTACGCCATGGAGATTAGTTCTGCTGCTTACAAAAACTTTTGGCGCTTTGACATGGATAGCCTCCCTGCAGATCTTATCCGCAGGGGAATGGCAGTACCTGACCAAACACAGCCACATGGTTTAAAGCTCACATTGGAAGACTATCCCTATGCAGCAGATGGAATACTAATCTGGTCTGCAATAGAAGACTGGGTTCGTACCTATGTGAACCATTACTACCCTCATTCAAGCGTGATATGCAATGACAAAGAGCTACAATCTTGGTACTCTGAGTCAATCAATGTAGGCCATGCAGACCTTAGGCATGAAAGCTGGTGGCCTACATTGAACAATAGTGAGGATCTTGTCTCCATTCTTTCCATATTAATATGGAATGCATCTGCACAACATGCTGCTCTTAACTTTGGTCAGTACCCTTATGGTGGATATGTGCCTAATCGCCCCCCACTAATGAGAAGGTTAATACCGGAAGAGAGTGATCCAGAATATGCAAGTTTCCTTGCTGACCCTCAAAAGTATTTTTTGAATGCATTGCCTAGCTTGTTGCAAGCCACAAAGTTCATGGCTGTGGTTGACACACTTTCCACTCACTCACCTGATGAGGAGTACTTGGGGGAGAGGCAACAACCTTCGATATGGTCTGGTGATGCTGAAATTATTGAGGCATTCTATGATTTCTCTGCAAAGATTAGACAGATAGAGAAGGTGATTGATAGCAGAAACCTTGATAGGACTCTAAAGAACCGTTGTGGTGCAGGTGTGTTGCCTTATGAGTTACTTGCTCCTAGCTCTCAACCTGGTGTTACATGCAGAGGGGTACCCAATAGTGTGTCCACATAACTTATCCTAAACTTATAAATAATAGAGTCACTTCCCACATTTTGATAAGTATTAATATGTGGTTGGCTTATTAGTTACTACTATATGGAAAGTGACTCAGTGGATACCCATTTTGTACCTAGATTTAGTGAATTATTATAGATATATTGGTAACCTAGAGTTGTATAGACTGTATATCAAAATGAGTTCGGTGGTTTTGGAGGATGTGTGACTGTTTATAAAATTATTATCACCATTTGTGGACATTTATATTTCTTTGGGCTCTGCTATTTAGTTCTTATTTTTGTCTTATCTGTGAGATAATAG 3168 0.4186 MGSSLLERSFFVPSSPSSLLNQTRFLLPLENKRFVRVKKAGKFPVAAISEDLMKGSSSSSSSSSSSSSSSVSTEKPVKFKVRAVITVRNKIKEDFKETIVKHIDAITDRIGRNVVLELVSTDIDPKTKAAKKSSEAVLKDWSKKSNLKAERVNYTAEFIVDSNFGEPGAITITNKHQKEFFLESITIEGFASGPVHFPCNSWVQARKDHPARRIFFSNKPYLPGDTPAGLRLLREKELRNLRGDGKGVRNLSDRIYDYDIYNDLGNPDKGNELARPNLGGSDMYPYPRRCRTGREPSDTDMYAESRVEKPLPMYVPRDERFEESKQNTFSVKRLKAVLHNLIPGLKASLSASNQDFNEFSDVDGLYSEGLLIKLGLQDDMLKKIPFVSKIQESSQGLLKYDTPKIISKDKFAWLRDDEFARQAIAGVNPVNIERLKVFPPVSKLDPEIYGPQESALKEEHILNQLNGMTVQEAINENKLFIIDYHDIYLPFLEGINALDGRKSYGTRTIFFLTPRGTLKPVAIELSLPHAGPSCRSKRVVTPPVDATTNWMWQLAKAHVCSNDAGVHQLVNHWLRTHANLEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQSLINADGIIENCFTPGRYAMEISSAAYKNFWRFDMDSLPADLIRRGMAVPDQTQPHGLKLTLEDYPYAADGILIWSAIEDWVRTYVNHYYPHSSVICNDKELQSWYSESINVGHADLRHESWWPTLNNSEDLVSILSILIWNASAQHAALNFGQYPYGGYVPNRPPLMRRLIPEESDPEYASFLADPQKYFLNALPSLLQATKFMAVVDTLSTHSPDEEYLGERQQPSIWSGDAEIIEAFYDFSAKIRQIEKVIDSRNLDRTLKNRCGAGVLPYELLAPSSQPGVTCRGVPNSVST 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01242 913 Gene3D - 411 544 - -
Pste6g01242 913 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 79 221 IPR036392 GO:0005515
Pste6g01242 913 ProSitePatterns Lipoxygenases iron-binding region signature 2. 594 604 IPR020834 GO:0016702|GO:0046872
Pste6g01242 913 PRINTS Plant lipoxygenase signature 353 374 IPR001246 GO:0016491
Pste6g01242 913 PRINTS Plant lipoxygenase signature 285 304 IPR001246 GO:0016491
Pste6g01242 913 PRINTS Plant lipoxygenase signature 437 456 IPR001246 GO:0016491
Pste6g01242 913 PRINTS Plant lipoxygenase signature 252 268 IPR001246 GO:0016491
Pste6g01242 913 PRINTS Plant lipoxygenase signature 504 528 IPR001246 GO:0016491
Pste6g01242 913 PRINTS Plant lipoxygenase signature 825 839 IPR001246 GO:0016491
Pste6g01242 913 PRINTS Plant lipoxygenase signature 398 414 IPR001246 GO:0016491
Pste6g01242 913 PRINTS Plant lipoxygenase signature 213 234 IPR001246 GO:0016491
Pste6g01242 913 PRINTS Plant lipoxygenase signature 187 205 IPR001246 GO:0016491
Pste6g01242 913 CDD PLAT_LH2 79 218 IPR042057 -
Pste6g01242 913 SUPERFAMILY Lipoxigenase 223 912 IPR036226 -
Pste6g01242 913 Gene3D - 546 912 - -
Pste6g01242 913 PRINTS Lipoxygenase signature 587 607 IPR013819 GO:0016702|GO:0046872
Pste6g01242 913 PRINTS Lipoxygenase signature 567 584 IPR013819 GO:0016702|GO:0046872
Pste6g01242 913 PRINTS Lipoxygenase signature 549 566 IPR013819 GO:0016702|GO:0046872
Pste6g01242 913 FunFam Lipoxygenase 61 221 - -
Pste6g01242 913 Pfam PLAT/LH2 domain 131 216 IPR001024 GO:0005515
Pste6g01242 913 ProSiteProfiles PLAT domain profile. 95 217 IPR001024 GO:0005515
Pste6g01242 913 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 220 913 IPR013819 GO:0016702|GO:0046872
Pste6g01242 913 PANTHER LIPOXYGENASE 88 912 IPR000907 GO:0016702|GO:0034440|GO:0046872
Pste6g01242 913 FunFam Lipoxygenase 325 411 - -
Pste6g01242 913 Pfam Lipoxygenase 230 896 IPR013819 GO:0016702|GO:0046872
Pste6g01242 913 Gene3D - 222 324 - -
Pste6g01242 913 SMART LH2_4 79 218 IPR001024 GO:0005515
Pste6g01242 913 Gene3D PLAT/LH2 domain 66 221 - -
Pste6g01242 913 Gene3D - 325 410 IPR027433 -
Pste6g01242 913 FunFam Lipoxygenase 412 544 - -
Pste6g01242 913 FunFam Lipoxygenase 222 324 - -
Pste6g01242 913 FunFam Lipoxygenase 546 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01242 Pste-Chr6 5318986 5325082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01242 1 912 Acyl Lipid Metabolism Gene Families AT1G17420 72.192 0.0 1375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01242 6 5318986 5325082 Pste6g01242 6 5318986 5325082 ECH