Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01229 atggccaagagttacttcaaacaagagcatgatcttgagaagagaagagctgaggctgctaggattagggagaaatacccagaccgtatcccggtgattgtggagaaggcagaaagaagtgatattccaagtattgataagaagaaactattagctatggttgagaaatttgttgatactggtaactggtaccttgttcctgctgatctgacagttggacagtttgtctatgttatccgcaaaaggattaaattaagcgcagaaaaggcaatctttatctttgtggacaacgtccttccacctacaggagcaattatgtctgccatttatgatgagaagaaggatgaagatgggtttctttatgttacttacagtggagaaaacacctttggggatctgacttcccactag 411 0.0 MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKLLAMVEKFVDTGNWYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFGDLTSH 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01229 136 FunFam Autophagy-related protein 1 131 - -
Pste6g01229 136 Pfam Autophagy protein Atg8 ubiquitin like 63 131 IPR004241 -
Pste6g01229 136 Pfam Autophagy protein Atg8 ubiquitin like 14 52 IPR004241 -
Pste6g01229 136 CDD Ubl_ATG8 12 128 - -
Pste6g01229 136 Gene3D - 1 131 - -
Pste6g01229 136 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 3 131 IPR004241 -
Pste6g01229 136 SUPERFAMILY Ubiquitin-like 3 131 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01229 Pste-Chr6 5250340 5257006 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01229 6 5250340 5257006 Pste6g01229 6 5250340 5257006 ECH