Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01221 CCGTCATTTCAACCACCCTCCTTCTCTCCTCACATTCACATTCACATAAACAACGCACAAGGTAGATTCTGCGAAAATCAACTCTCTCCCTCTCTTTCTCTCTCCTGCTTCCATTTCCGTTTCCGTTTCCGTTTCCATTTCCATTTCCAAACGTATTTGACTTTCTTACCTTCAATTTCAGAGTCCCCTCTTTGTAAATTCTTATCTATTTAGGGTTCTTTCTTCACCCCCTCATAAAAAATTTCTGTATATAAACACCACCCTTCCCGATACAAAGAAATTTTTTTAATCCCACAATTATTCAATCAAACAATTTCCATTTCCATTTTATTTTTCCCTCTGGACAGACATAGGGAATTACTCTTCCAGTTTGCCTCTGTTTGAGTCTTCCCTTTCTCAAATTCGGAGCCCCCCCAAAAATAATCTAATTATTCGGCTATCTTTTTTTCTTAGATTTCCTAAAGGGTATTAAAAAATTGTTACTTCACCATTTATTCCGATTTATTCGTGTTAGGGATTGAAAATCTGAAAAGTGAAAACCCTAATTGCGAATTTGTGACCTCCTTTCATGGCGGTTTCTACGATAGCCTTATACGCAAGTCCACCGAGCAGCGTGTGTTCCACGCCGCATCCGTGCCAGATCAACGCACACGCTTCCTACGACTTCGAATTGGGGTCGCGATCTTCGTCGCCGGCGGCATCAACTGCGCCGCCGTCTACGTCGCAGAAGCCGGTGATGGGAGGCCTCTCGTGCCTTTTCTCGTCGCCGACCCCGGCTGCGAAGCATTCGCCGCTGTCATCTAACTTTTCCGGCGAGGAGGACGAGTTGAAGGAACTGAGCAGCTCCTTCTCGTATTCTCCGAGCAAATTTGGAGTGTCTTCGTGGAAGAGGGATCAAAGTCCTGTGTCGGTGTTTCATGGTCCTGTTTCGTGTAGCAGTAGTGGTAGAAGTTGCACAGGTTCCACCCCTGTAAGGAGTTTCAGGGGTGGGACTAGTGGGTTGCTTTATGGGTTTGTGAGGAATGCGTTGGGGTCTTCTTGTTTGGAGTATGACTTAGATGCGGGTGATTCTTCTGCTCTGATTGATGAGTTGACCTTCAATCTGGAGGATAATTTCGTGGAGGGTGGGTTTCAGTTTGAGCCCTATGCTAAAAAGTTGCTTTTGGGGGCGCAGTTGAGGCACAAGATCTTCTGTGAGAAGTTTGTTATCAAGGCCTTTTGTGAAGCTGAGAAAGCACACAGAGGGCAGATGCGGGCTAGTGGGGATCCTTACCTGCAGCATTGTTTGGAGACGGCTGTGTTGCTGGCTTTGATTGGTGCCAATTCCACTGTTGTGGCTGCGGGGCTCTTACATGATACCCTTGATGACGCTTTTCTGTCTTATGATTACATATTTGGGATGTTTGGCGCTGGAGTTGCTGATTTAGTTGAAGGGGTTTCTAAACTGAGCCACTTAAGCAAACTTGCTCGAGAAAATAATACAGCCAGCAAGTCAATTGAAGCAGACCGCTTGCATACTATGTTCCTTGCCATGGCAGATGCAAGAGCTGTCCTCATTAAATTAGCAGATCGATTACATAATATGATGACACTAGATGCTTTGCCAGTGGCCAAGCGACAGAGGTTTGCAAAGGAAACTTTGGAGATTTTTACACCTTTGGCCAATCGCTTAGGAATTTCTAGTTGGAAGGAACAATTAGAAAATTTGTGTTTCAAGCATCTCAACCCTAGCCAGCATGAGGAGCTTTCATCAAAGCTTGTGGAATCGTATGATGATGCAATGATCACATCTGCGATAGACAGATTAGAGCAAGCACTTAAAGATGAAGGCATATCTTATAATGTCATTTCTGGGCGGCATAAGAGCTTGTATAGCATTTATTGCAAAATGTTAAAGAAGAAACTAACTATAGATGATATCCATGACATTTATGGGCTACGCTTGATTGTTGACAAGGAAGAAGACTGTTATAAGGCCTTAACTGTTGTTCATCAGTTATGGTCTGAGGTACCTGGAAAGCTGAAAGATTACATATTTTGTCCCAAGTTTAACGGATATCAATCTCTGCATACTGTTGTGATGGGTGATGGTAAGGTTCCCCTTGAAGTACAAATTCGGACCAAAGATATGCATTTACAAGCAGAATTTGGATTTGCTGCTCATTGGAGATACAAGGAAGATGATTGTCAGCATTCTTCATTTGTGCTTCAGATGGTTGAGTGGGCTCGATGGGTTGTCACCTGGCAGTGTGAAGCAATGAGTAAAGATTGTTCATCTGTTGGATATGCTGATTCCGTCAAGCCCCCATGCAAGTTCCCTTCTCATTCTGCTGATTGCCCATATTCTTATAAGCCAGAGTGTGGTCAGAATGGACCTGTGTTCGTTATCATGATTGAGAATGACAAGATGTCTGTCCAAGAATTTAATGCAAACTCAACCATATTGGATTTATTGGAAAGAGCTGGACGTGCAAGCTCTAGGTTGACGACATATAGGTTCCCGTTGAAGGAAGAGTTGAGGCCAAGGATGAATCATAAGCCTGTGAGTGATCCCAATAGCAAGTTGAAGATGGGAGATGTGATTGAACTTACACCAGCCATACCTGACAAGTCTCTTACAGAATATAGGGAAGAAATCCAGCGTATGTATGAACGCGGGCTAACTGTATCAAGCATGGGAACTGCTGCAAGCACCATGGTTGGCTCAAGAAGTTGAGCCGTCCTCGGATTTCACTTCAAGTCCAACATGAAATTATTTAGTGGCAGTTATGTATATAGAAATATTTGTACATAAACAACTATGTTACTACTATGAACTTTCTAACTTGATTCAATTATGTGCTGAATTATTGATTTATGTAGTTGGTCCAATGGTCCTGATTAATTAATTTCAGCCCACCCACTTCCATTGTAGAGTTCTAGTTTTATTCGTAGTCCTGCCATCGTCAAATAGTTTTATCTATAATGTGGGATGAACAAGAGGGAGACAAAATATGAGACATAAAGAGCAATAAAATCCGTTTGG 3025 0.4284 MAVSTIALYASPPSSVCSTPHPCQINAHASYDFELGSRSSSPAASTAPPSTSQKPVMGGLSCLFSSPTPAAKHSPLSSNFSGEEDELKELSSSFSYSPSKFGVSSWKRDQSPVSVFHGPVSCSSSGRSCTGSTPVRSFRGGTSGLLYGFVRNALGSSCLEYDLDAGDSSALIDELTFNLEDNFVEGGFQFEPYAKKLLLGAQLRHKIFCEKFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTLDDAFLSYDYIFGMFGAGVADLVEGVSKLSHLSKLARENNTASKSIEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPVAKRQRFAKETLEIFTPLANRLGISSWKEQLENLCFKHLNPSQHEELSSKLVESYDDAMITSAIDRLEQALKDEGISYNVISGRHKSLYSIYCKMLKKKLTIDDIHDIYGLRLIVDKEEDCYKALTVVHQLWSEVPGKLKDYIFCPKFNGYQSLHTVVMGDGKVPLEVQIRTKDMHLQAEFGFAAHWRYKEDDCQHSSFVLQMVEWARWVVTWQCEAMSKDCSSVGYADSVKPPCKFPSHSADCPYSYKPECGQNGPVFVIMIENDKMSVQEFNANSTILDLLERAGRASSRLTTYRFPLKEELRPRMNHKPVSDPNSKLKMGDVIELTPAIPDKSLTEYREEIQRMYERGLTVSSMGTAASTMVGSRS 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01221 715 Gene3D Beta Polymerase, domain 2 389 519 IPR043519 -
Pste6g01221 715 PANTHER GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE 98 681 - -
Pste6g01221 715 SUPERFAMILY Nucleotidyltransferase 376 565 IPR043519 -
Pste6g01221 715 FunFam GTP pyrophosphokinase RelA 387 519 - -
Pste6g01221 715 Pfam Region found in RelA / SpoT proteins 429 538 IPR007685 GO:0015969
Pste6g01221 715 CDD NT_Rel-Spo_like 409 527 IPR007685 GO:0015969
Pste6g01221 715 ProSiteProfiles HD domain profile. 235 339 IPR006674 -
Pste6g01221 715 ProSiteProfiles S4 RNA-binding domain profile. 655 689 - -
Pste6g01221 715 Gene3D Hypothetical protein af1432 204 386 - -
Pste6g01221 715 FunFam GTP pyrophosphokinase RelA 197 386 - -
Pste6g01221 715 SMART hd_13 231 348 IPR003607 -
Pste6g01221 715 CDD HDc 233 361 IPR003607 -
Pste6g01221 715 SMART RelA_SpoT_2 429 539 IPR007685 GO:0015969
Pste6g01221 715 Pfam HD domain 220 370 - -
Pste6g01221 715 SUPERFAMILY HD-domain/PDEase-like 196 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01221 Pste-Chr6 5213608 5218170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01221 230 536 EF-hand Containing Proteins AT3G17470 31.003 3.28e-37 143
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01221 6 5213608 5218170 Pste6g01221 6 5213608 5218170 ECH